Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RNU1-149P-201ENST00000390870 161 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 EI24P3-201ENST00000399046 1062 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 RNA5SP487-201ENST00000410186 122 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 NPM1P4-201ENST00000414095 812 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 AC079355.1-201ENST00000421770 223 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 AC244033.1-201ENST00000426826 870 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 VN1R96P-201ENST00000446052 858 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 RPS4XP1-201ENST00000482189 787 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 AC097173.1-201ENST00000505862 819 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 BX510359.5-201ENST00000515651 304 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 RNU6-941P-201ENST00000516346 108 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 AL049830.4-201ENST00000555149 351 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 RPL10P14-201ENST00000565265 298 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 FKBP1AP1-201ENST00000594588 318 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 BNIP3P35-201ENST00000604530 490 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 SNORD91B-202ENST00000608459 222 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 AC109309.2-201ENST00000612597 332 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 MIR6862-1-201ENST00000613016 70 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 MIR6862-2-201ENST00000614755 70 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 AC093849.1-201ENST00000563631 2209 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 RNA5SP339-201ENST00000390987 122 ntBASIC4.54□□□□□ -1.68
HLA-DPB1P04440 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 AC017078.1-201ENST00000416146 368 ntBASIC4.54□□□□□ -1.68
HLA-DPB1P04440 SETP9-201ENST00000423837 832 ntBASIC4.54□□□□□ -1.68
HLA-DPB1P04440 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 SPRYD7P1-201ENST00000443861 570 ntBASIC4.54□□□□□ -1.68
HLA-DPB1P04440 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 AC135999.1-201ENST00000478962 479 ntBASIC4.54□□□□□ -1.68
HLA-DPB1P04440 RN7SL441P-201ENST00000492388 296 ntBASIC4.54□□□□□ -1.68
HLA-DPB1P04440 ATP5LP3-201ENST00000514223 304 ntBASIC4.54□□□□□ -1.68
HLA-DPB1P04440 RNU6-1334P-201ENST00000516032 105 ntBASIC4.54□□□□□ -1.68
HLA-DPB1P04440 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 IGKV2-18-201ENST00000522607 343 ntBASIC4.54□□□□□ -1.68
HLA-DPB1P04440 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 AC126177.5-201ENST00000549599 178 ntBASIC4.54□□□□□ -1.68
HLA-DPB1P04440 SETP1-201ENST00000556014 845 ntBASIC4.54□□□□□ -1.68
HLA-DPB1P04440 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 AC006272.2-201ENST00000594725 163 ntBASIC4.54□□□□□ -1.68
HLA-DPB1P04440 AP000864.1-201ENST00000609424 650 ntBASIC4.54□□□□□ -1.68
HLA-DPB1P04440 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 CYP4F35P-202ENST00000636121 390 ntBASIC4.54□□□□□ -1.68
HLA-DPB1P04440 AC074101.1-201ENST00000637861 241 ntBASIC4.54□□□□□ -1.68
HLA-DPB1P04440 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DPB1P04440 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DPB1P04440 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DPB1P04440 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
HLA-DPB1P04440 CR383656.5-201ENST00000547616 1340 ntBASIC4.53□□□□□ -1.68
HLA-DPB1P04440 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DPB1P04440 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
HLA-DPB1P04440 RN7SKP162-201ENST00000363605 345 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms