Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL2A1P02458 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
COL2A1P02458 AL449283.1-201ENST00000602631 3403 ntBASIC5.87□□□□□ -1.47
COL2A1P02458 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL2A1P02458 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL2A1P02458 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL2A1P02458 ZNF652P1-201ENST00000442420 1309 ntBASIC5.86□□□□□ -1.47
COL2A1P02458 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL2A1P02458 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.86□□□□□ -1.47
COL2A1P02458 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL2A1P02458 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
COL2A1P02458 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.86□□□□□ -1.47
COL2A1P02458 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.86□□□□□ -1.47
COL2A1P02458 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
COL2A1P02458 RNA5SP191-201ENST00000362585 102 ntBASIC5.86□□□□□ -1.47
COL2A1P02458 AL035079.1-201ENST00000405210 287 ntBASIC5.86□□□□□ -1.47
COL2A1P02458 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.86□□□□□ -1.47
COL2A1P02458 CYCSP11-201ENST00000436426 315 ntBASIC5.86□□□□□ -1.47
COL2A1P02458 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
COL2A1P02458 RPL23AP56-201ENST00000460778 453 ntBASIC5.86□□□□□ -1.47
COL2A1P02458 RPL23AP72-201ENST00000492447 435 ntBASIC5.86□□□□□ -1.47
COL2A1P02458 AC016559.2-201ENST00000510759 359 ntBASIC5.86□□□□□ -1.47
COL2A1P02458 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.86□□□□□ -1.47
COL2A1P02458 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL2A1P02458 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.86□□□□□ -1.47
COL2A1P02458 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.86□□□□□ -1.47
COL2A1P02458 NDUFB4P11-201ENST00000560510 395 ntBASIC5.86□□□□□ -1.47
COL2A1P02458 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.86□□□□□ -1.47
COL2A1P02458 AC040958.1-201ENST00000561102 201 ntBASIC5.86□□□□□ -1.47
COL2A1P02458 BNIP3P5-201ENST00000562290 498 ntBASIC5.86□□□□□ -1.47
COL2A1P02458 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.86□□□□□ -1.47
COL2A1P02458 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL2A1P02458 AC098935.2-201ENST00000604222 466 ntBASIC5.86□□□□□ -1.47
COL2A1P02458 AL109618.2-201ENST00000605527 211 ntBASIC5.86□□□□□ -1.47
COL2A1P02458 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
COL2A1P02458 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL2A1P02458 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.86□□□□□ -1.47
COL2A1P02458 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.86□□□□□ -1.47
COL2A1P02458 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL2A1P02458 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.86□□□□□ -1.47
COL2A1P02458 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL2A1P02458 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL2A1P02458 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
COL2A1P02458 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.85□□□□□ -1.47
COL2A1P02458 AC007618.1-201ENST00000366455 732 ntBASIC5.85□□□□□ -1.47
COL2A1P02458 U3.30-201ENST00000391308 210 ntBASIC5.85□□□□□ -1.47
COL2A1P02458 GLULP6-201ENST00000399502 913 ntBASIC5.85□□□□□ -1.47
COL2A1P02458 RNA5SP345-201ENST00000410646 108 ntBASIC5.85□□□□□ -1.47
COL2A1P02458 AC004690.1-201ENST00000418216 328 ntBASIC5.85□□□□□ -1.47
COL2A1P02458 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.85□□□□□ -1.47
COL2A1P02458 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.85□□□□□ -1.47
COL2A1P02458 AL450023.3-201ENST00000440592 271 ntBASIC5.85□□□□□ -1.47
COL2A1P02458 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.85□□□□□ -1.47
COL2A1P02458 AL691482.1-201ENST00000453255 87 ntBASIC5.85□□□□□ -1.47
COL2A1P02458 RPL10P17-201ENST00000453852 316 ntBASIC5.85□□□□□ -1.47
COL2A1P02458 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.85□□□□□ -1.47
COL2A1P02458 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.85□□□□□ -1.47
COL2A1P02458 ENPP7P9-201ENST00000514456 627 ntBASIC5.85□□□□□ -1.47
COL2A1P02458 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.85□□□□□ -1.47
COL2A1P02458 RN7SKP122-201ENST00000515923 296 ntBASIC5.85□□□□□ -1.47
COL2A1P02458 SNORA70.11-201ENST00000515987 138 ntBASIC5.85□□□□□ -1.47
COL2A1P02458 SNORA70.13-201ENST00000516116 138 ntBASIC5.85□□□□□ -1.47
COL2A1P02458 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.85□□□□□ -1.47
COL2A1P02458 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC5.85□□□□□ -1.47
COL2A1P02458 AC105129.1-201ENST00000560250 297 ntBASIC5.85□□□□□ -1.47
COL2A1P02458 AC116553.2-201ENST00000564203 463 ntBASIC5.85□□□□□ -1.47
COL2A1P02458 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.85□□□□□ -1.47
COL2A1P02458 AC103792.1-201ENST00000603591 919 ntBASIC5.85□□□□□ -1.47
COL2A1P02458 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.85□□□□□ -1.47
COL2A1P02458 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
COL2A1P02458 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL2A1P02458 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL2A1P02458 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.85□□□□□ -1.47
COL2A1P02458 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL2A1P02458 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
COL2A1P02458 AP005432.1-201ENST00000580891 3485 ntBASIC5.85□□□□□ -1.47
COL2A1P02458 SMG1P7-201ENST00000565246 2704 ntBASIC5.85□□□□□ -1.47
COL2A1P02458 AC125257.1-201ENST00000560400 2930 ntBASIC5.85□□□□□ -1.47
COL2A1P02458 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL2A1P02458 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL2A1P02458 SMG1P6-201ENST00000532337 2930 ntBASIC5.84□□□□□ -1.47
COL2A1P02458 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
COL2A1P02458 FAM3C2-201ENST00000312214 681 ntBASIC5.84□□□□□ -1.47
COL2A1P02458 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL2A1P02458 SNORA70.10-201ENST00000384515 134 ntBASIC5.84□□□□□ -1.47
COL2A1P02458 RSU1P3-201ENST00000412878 835 ntBASIC5.84□□□□□ -1.47
COL2A1P02458 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.84□□□□□ -1.47
COL2A1P02458 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.84□□□□□ -1.47
COL2A1P02458 AC068287.1-201ENST00000430283 295 ntBASIC5.84□□□□□ -1.47
COL2A1P02458 NRBF2P3-201ENST00000432731 865 ntBASIC5.84□□□□□ -1.47
COL2A1P02458 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
COL2A1P02458 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.84□□□□□ -1.47
COL2A1P02458 AC012512.1-201ENST00000446594 718 ntBASIC5.84□□□□□ -1.47
COL2A1P02458 OR1H1P-201ENST00000448731 937 ntBASIC5.84□□□□□ -1.47
COL2A1P02458 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.84□□□□□ -1.47
COL2A1P02458 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
COL2A1P02458 MIR3160-1-201ENST00000577972 85 ntBASIC5.84□□□□□ -1.47
COL2A1P02458 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.84□□□□□ -1.47
COL2A1P02458 AC019206.1-201ENST00000621938 425 ntBASIC5.84□□□□□ -1.47
COL2A1P02458 AC087821.1-201ENST00000623639 567 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms