Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC2.14□□□□□ -2.07
USH2AO75445 AC012400.1-201ENST00000518452 381 ntBASIC2.14□□□□□ -2.07
USH2AO75445 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.14□□□□□ -2.07
USH2AO75445 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 MIR6715A-201ENST00000615929 79 ntBASIC2.14□□□□□ -2.07
USH2AO75445 ZNF840P-201ENST00000504759 1996 ntBASIC2.14□□□□□ -2.07
USH2AO75445 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC2.14□□□□□ -2.07
USH2AO75445 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
USH2AO75445 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC2.14□□□□□ -2.07
USH2AO75445 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
USH2AO75445 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC2.14□□□□□ -2.07
USH2AO75445 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC2.14□□□□□ -2.07
USH2AO75445 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC2.14□□□□□ -2.07
USH2AO75445 SNORD8-201ENST00000363915 110 ntBASIC2.14□□□□□ -2.07
USH2AO75445 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC2.14□□□□□ -2.07
USH2AO75445 TMA16P2-201ENST00000413187 601 ntBASIC2.14□□□□□ -2.07
USH2AO75445 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC2.14□□□□□ -2.07
USH2AO75445 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC2.14□□□□□ -2.07
USH2AO75445 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC2.14□□□□□ -2.07
USH2AO75445 TPT1P3-201ENST00000492841 512 ntBASIC2.14□□□□□ -2.07
USH2AO75445 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC2.14□□□□□ -2.07
USH2AO75445 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC2.14□□□□□ -2.07
USH2AO75445 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC2.14□□□□□ -2.07
USH2AO75445 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.14□□□□□ -2.07
USH2AO75445 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.14□□□□□ -2.07
USH2AO75445 MIR6852-201ENST00000621699 66 ntBASIC2.14□□□□□ -2.07
USH2AO75445 ZFRP1-201ENST00000457579 2970 ntBASIC2.14□□□□□ -2.07
USH2AO75445 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC2.14□□□□□ -2.07
USH2AO75445 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC2.14□□□□□ -2.07
USH2AO75445 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
USH2AO75445 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC2.14□□□□□ -2.07
USH2AO75445 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC2.14□□□□□ -2.07
USH2AO75445 ZAN-204ENST00000546292 8378 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
USH2AO75445 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
USH2AO75445 RNA5SP22-201ENST00000365393 109 ntBASIC2.14□□□□□ -2.07
USH2AO75445 SNORA2.3-201ENST00000383920 135 ntBASIC2.14□□□□□ -2.07
USH2AO75445 AL021331.1-201ENST00000402817 582 ntBASIC2.14□□□□□ -2.07
USH2AO75445 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC2.14□□□□□ -2.07
USH2AO75445 RN7SL810P-201ENST00000493031 276 ntBASIC2.14□□□□□ -2.07
USH2AO75445 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC2.14□□□□□ -2.07
USH2AO75445 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC2.14□□□□□ -2.07
USH2AO75445 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC2.14□□□□□ -2.07
USH2AO75445 AC096553.1-201ENST00000605169 829 ntBASIC2.14□□□□□ -2.07
USH2AO75445 MIR6867-201ENST00000610636 67 ntBASIC2.14□□□□□ -2.07
USH2AO75445 AC140479.6-201ENST00000633535 357 ntBASIC2.14□□□□□ -2.07
USH2AO75445 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC2.14□□□□□ -2.07
USH2AO75445 AP000350.7-201ENST00000624923 8030 ntBASIC2.14□□□□□ -2.07
USH2AO75445 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC2.14□□□□□ -2.07
USH2AO75445 AC006042.3-201ENST00000454684 1469 ntBASIC2.14□□□□□ -2.07
USH2AO75445 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC2.14□□□□□ -2.07
USH2AO75445 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC2.14□□□□□ -2.07
USH2AO75445 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC2.14□□□□□ -2.07
USH2AO75445 DDX18P6-201ENST00000450119 1997 ntBASIC2.14□□□□□ -2.07
USH2AO75445 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC2.14□□□□□ -2.07
USH2AO75445 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
USH2AO75445 USP31-201ENST00000219689 10699 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
USH2AO75445 SNORA70.10-201ENST00000384515 134 ntBASIC2.14□□□□□ -2.07
USH2AO75445 AP000907.1-201ENST00000428428 510 ntBASIC2.14□□□□□ -2.07
USH2AO75445 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC2.14□□□□□ -2.07
USH2AO75445 AC104978.1-201ENST00000449387 391 ntBASIC2.14□□□□□ -2.07
USH2AO75445 AC022336.1-201ENST00000475510 337 ntBASIC2.14□□□□□ -2.07
USH2AO75445 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC2.14□□□□□ -2.07
USH2AO75445 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC2.14□□□□□ -2.07
USH2AO75445 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC2.14□□□□□ -2.07
USH2AO75445 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC2.14□□□□□ -2.07
USH2AO75445 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.14□□□□□ -2.07
USH2AO75445 CR392039.4-201ENST00000624968 501 ntBASIC2.14□□□□□ -2.07
USH2AO75445 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
USH2AO75445 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
USH2AO75445 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC2.13□□□□□ -2.07
USH2AO75445 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 AC079097.1-201ENST00000512187 1399 ntBASIC2.13□□□□□ -2.07
USH2AO75445 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms