Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN5O00501 RFPL4AP3-201ENST00000515267 345 ntBASIC5.32□□□□□ -1.56
CLDN5O00501 RNU4-18P-201ENST00000516751 149 ntBASIC5.32□□□□□ -1.56
CLDN5O00501 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.32□□□□□ -1.56
CLDN5O00501 AP000676.2-201ENST00000529711 301 ntBASIC5.32□□□□□ -1.56
CLDN5O00501 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.32□□□□□ -1.56
CLDN5O00501 NMNAT1P1-201ENST00000554095 876 ntBASIC5.32□□□□□ -1.56
CLDN5O00501 MIR4433B-201ENST00000581329 102 ntBASIC5.32□□□□□ -1.56
CLDN5O00501 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.32□□□□□ -1.56
CLDN5O00501 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.32□□□□□ -1.56
CLDN5O00501 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN5O00501 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN5O00501 AC004817.4-201ENST00000602396 3625 ntBASIC5.32□□□□□ -1.56
CLDN5O00501 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN5O00501 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN5O00501 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN5O00501 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN5O00501 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CLDN5O00501 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN5O00501 AC093909.5-201ENST00000621839 1799 ntBASIC5.32□□□□□ -1.56
CLDN5O00501 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN5O00501 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN5O00501 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN5O00501 AC018628.1-201ENST00000624147 3819 ntBASIC5.31□□□□□ -1.56
CLDN5O00501 DDX18P6-201ENST00000450119 1997 ntBASIC5.31□□□□□ -1.56
CLDN5O00501 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN5O00501 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN5O00501 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CLDN5O00501 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.31□□□□□ -1.56
CLDN5O00501 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN5O00501 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
CLDN5O00501 AC007618.1-201ENST00000366455 732 ntBASIC5.31□□□□□ -1.56
CLDN5O00501 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN5O00501 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN5O00501 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN5O00501 COX6CP13-201ENST00000428703 226 ntBASIC5.31□□□□□ -1.56
CLDN5O00501 RPL5P2-201ENST00000429598 854 ntBASIC5.31□□□□□ -1.56
CLDN5O00501 RPS27P18-201ENST00000431701 247 ntBASIC5.31□□□□□ -1.56
CLDN5O00501 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN5O00501 TXNP5-201ENST00000441043 315 ntBASIC5.31□□□□□ -1.56
CLDN5O00501 OR7E125P-201ENST00000443450 846 ntBASIC5.31□□□□□ -1.56
CLDN5O00501 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN5O00501 PRPF38AP1-201ENST00000451976 933 ntBASIC5.31□□□□□ -1.56
CLDN5O00501 SBDSP1-204ENST00000453858 737 ntBASIC5.31□□□□□ -1.56
CLDN5O00501 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN5O00501 RN7SL319P-201ENST00000480656 221 ntBASIC5.31□□□□□ -1.56
CLDN5O00501 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN5O00501 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CLDN5O00501 AC100784.1-201ENST00000522790 310 ntBASIC5.31□□□□□ -1.56
CLDN5O00501 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN5O00501 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN5O00501 AC025423.2-201ENST00000537570 439 ntBASIC5.31□□□□□ -1.56
CLDN5O00501 AC008033.2-201ENST00000542626 177 ntBASIC5.31□□□□□ -1.56
CLDN5O00501 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN5O00501 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.31□□□□□ -1.56
CLDN5O00501 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.31□□□□□ -1.56
CLDN5O00501 AC087783.2-201ENST00000605070 562 ntBASIC5.31□□□□□ -1.56
CLDN5O00501 Mico1.1-201ENST00000611698 204 ntBASIC5.31□□□□□ -1.56
CLDN5O00501 AC087385.3-201ENST00000620477 187 ntBASIC5.31□□□□□ -1.56
CLDN5O00501 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN5O00501 AP000550.3-201ENST00000637734 379 ntBASIC5.31□□□□□ -1.56
CLDN5O00501 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN5O00501 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN5O00501 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN5O00501 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN5O00501 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN5O00501 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN5O00501 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN5O00501 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CLDN5O00501 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN5O00501 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN5O00501 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN5O00501 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN5O00501 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
CLDN5O00501 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN5O00501 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN5O00501 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN5O00501 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN5O00501 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN5O00501 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN5O00501 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CLDN5O00501 ATP5HP3-201ENST00000396994 486 ntBASIC5.3□□□□□ -1.56
CLDN5O00501 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN5O00501 RN7SKP16-201ENST00000410180 299 ntBASIC5.3□□□□□ -1.56
CLDN5O00501 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN5O00501 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN5O00501 AL590399.4-201ENST00000436561 601 ntBASIC5.3□□□□□ -1.56
CLDN5O00501 HIGD1AP8-201ENST00000453927 274 ntBASIC5.3□□□□□ -1.56
CLDN5O00501 HMGB1P4-201ENST00000455362 567 ntBASIC5.3□□□□□ -1.56
CLDN5O00501 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN5O00501 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.3□□□□□ -1.56
CLDN5O00501 AC113398.2-201ENST00000507630 558 ntBASIC5.3□□□□□ -1.56
CLDN5O00501 AP001922.4-201ENST00000526967 290 ntBASIC5.3□□□□□ -1.56
CLDN5O00501 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.3□□□□□ -1.56
CLDN5O00501 GCSHP4-201ENST00000538792 439 ntBASIC5.3□□□□□ -1.56
CLDN5O00501 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN5O00501 AC112694.2-201ENST00000623697 768 ntBASIC5.3□□□□□ -1.56
CLDN5O00501 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN5O00501 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN5O00501 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms