Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CD248Q9HCU0 RPS3AP22-201ENST00000488297 769 ntBASIC6.32□□□□□ -1.4
CD248Q9HCU0 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.32□□□□□ -1.4
CD248Q9HCU0 OR5H7P-201ENST00000514084 930 ntBASIC6.32□□□□□ -1.4
CD248Q9HCU0 RN7SKP238-201ENST00000516483 249 ntBASIC6.32□□□□□ -1.4
CD248Q9HCU0 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.32□□□□□ -1.4
CD248Q9HCU0 AC105185.1-201ENST00000518705 535 ntBASIC6.32□□□□□ -1.4
CD248Q9HCU0 AC010476.1-201ENST00000519111 851 ntBASIC6.32□□□□□ -1.4
CD248Q9HCU0 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.32□□□□□ -1.4
CD248Q9HCU0 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CD248Q9HCU0 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC6.32□□□□□ -1.4
CD248Q9HCU0 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.32□□□□□ -1.4
CD248Q9HCU0 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.32□□□□□ -1.4
CD248Q9HCU0 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.32□□□□□ -1.4
CD248Q9HCU0 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC6.32□□□□□ -1.4
CD248Q9HCU0 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CD248Q9HCU0 AC084373.1-201ENST00000603311 235 ntBASIC6.32□□□□□ -1.4
CD248Q9HCU0 AC067838.1-201ENST00000606064 577 ntBASIC6.32□□□□□ -1.4
CD248Q9HCU0 AC024255.1-201ENST00000614376 102 ntBASIC6.32□□□□□ -1.4
CD248Q9HCU0 AC069234.4-201ENST00000621276 412 ntBASIC6.32□□□□□ -1.4
CD248Q9HCU0 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.32□□□□□ -1.4
CD248Q9HCU0 OR7A1P-202ENST00000641542 1158 ntBASIC6.32□□□□□ -1.4
CD248Q9HCU0 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CD248Q9HCU0 AC008627.1-201ENST00000517511 1704 ntBASIC6.32□□□□□ -1.4
CD248Q9HCU0 AL355488.2-201ENST00000609909 2850 ntBASIC6.32□□□□□ -1.4
CD248Q9HCU0 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CD248Q9HCU0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.32□□□□□ -1.4
CD248Q9HCU0 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CD248Q9HCU0 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CD248Q9HCU0 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CD248Q9HCU0 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CD248Q9HCU0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CD248Q9HCU0 RLIMP2-201ENST00000427891 1563 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 AC091305.2-201ENST00000624049 1576 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 KARSP1-201ENST00000451871 1752 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 RNU1-49P-201ENST00000363468 159 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 RNU6-618P-201ENST00000363518 112 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 AC005522.1-201ENST00000395416 346 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 AL050335.1-201ENST00000396909 869 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 AL121977.1-201ENST00000401636 979 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 AL356131.1-201ENST00000405826 414 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 AL355615.1-201ENST00000406187 641 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 RPL30P16-201ENST00000419341 429 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 RPL12P43-201ENST00000420608 499 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 AC007562.1-201ENST00000421819 517 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 CHEK2P5-201ENST00000423877 246 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 MTND6P12-201ENST00000428247 522 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 AL391987.1-201ENST00000441025 200 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 ARL4AP3-201ENST00000441452 574 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 AC118469.1-201ENST00000442943 488 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 AC023274.2-201ENST00000445264 521 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 EXTL2P1-201ENST00000446218 416 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 MORF4-201ENST00000447135 971 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 CFL1P4-201ENST00000451536 498 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CD248Q9HCU0 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 AC108475.1-201ENST00000507880 950 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 AC090958.1-201ENST00000511122 351 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 SNORA3.4-201ENST00000515969 96 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 DUXAP6-201ENST00000553858 601 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 AC007956.1-201ENST00000555623 542 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 AGGF1P9-201ENST00000561884 913 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 AC090651.1-201ENST00000567865 634 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 AC004987.4-201ENST00000603383 338 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 AL357078.3-201ENST00000607528 618 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 AC129778.1-202ENST00000623812 261 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CD248Q9HCU0 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms