Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AC217777.1-201ENST00000570034 1471 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AC130464.1-201ENST00000416201 1500 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 MTCO1P11-201ENST00000429111 1528 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 F11-AS1-202ENST00000508110 1512 ntTSL 5 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 DNAJC5G-204ENST00000406962 1562 ntTSL 5 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 ZNF410-224ENST00000615736 1551 ntTSL 5 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AL049780.3-201ENST00000624612 1583 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 MITF-214ENST00000472437 1995 ntAPPRIS ALT1 TSL 2 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 PPP3CA-205ENST00000507176 1958 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 SLC25A14-201ENST00000218197 1616 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AC011978.2-201ENST00000569835 2054 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 ATP5O-201ENST00000290299 932 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 OR7G3-201ENST00000305444 939 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 OR5J1P-201ENST00000313544 939 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 CSAG4-201ENST00000361201 755 ntTSL 2 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 RN7SKP25-201ENST00000362449 308 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 RNU4-1-201ENST00000363925 141 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 SNORD46-201ENST00000364043 104 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 BPIFA3-202ENST00000375454 1116 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 SSX9-201ENST00000376909 591 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 FAM107B-202ENST00000378458 1284 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 SNORA69-201ENST00000383895 132 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 SNORA30-201ENST00000384028 129 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 RNU6-606P-201ENST00000384721 111 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 TRBV27-201ENST00000390399 387 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 RNU6-952P-201ENST00000391164 108 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 CREM-214ENST00000395887 849 ntTSL 5 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 PRH2-202ENST00000396400 673 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 NXNP1-201ENST00000397383 1051 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AL034417.1-201ENST00000399343 800 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AL078604.1-201ENST00000404609 466 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AL356967.1-201ENST00000406305 431 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 OR4K12P-201ENST00000406538 961 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AC127391.1-201ENST00000411737 98 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 ING4-203ENST00000412586 741 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AC244452.1-201ENST00000413798 141 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 RPS19P1-201ENST00000415286 434 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AL450322.1-201ENST00000415358 313 ntTSL 3 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AC009161.1-201ENST00000417306 376 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 RPS7P8-201ENST00000418311 581 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AC013429.2-201ENST00000418798 781 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 ING4-204ENST00000423703 602 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AC008074.2-201ENST00000425381 429 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 MTCO2P12-201ENST00000427426 682 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms