Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 AL359091.2-201ENST00000609303 556 ntBASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 ZNF806-201ENST00000438300 1774 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 XPOTP1-201ENST00000443317 2398 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 SNORD116-4-201ENST00000384733 96 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 RNA5SP474-201ENST00000391234 90 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 NUDT19P3-201ENST00000404698 555 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 RPL23AP39-201ENST00000415533 405 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 ZNF736P2Y-201ENST00000416040 1279 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AC009302.1-201ENST00000417147 390 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AC008280.1-201ENST00000418851 412 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 LINC00993-201ENST00000420453 540 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AC093698.1-201ENST00000423843 571 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AL031736.2-201ENST00000426573 787 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 TMX2P1-201ENST00000436507 708 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AC010301.1-201ENST00000473936 355 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 HSPE1P23-201ENST00000509838 286 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 SNX18P23-201ENST00000510867 677 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AC091965.2-201ENST00000512324 613 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 RGS5-218ENST00000526176 574 ntTSL 4 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 CASP1-212ENST00000531166 300 ntTSL 5 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 OR4A21P-201ENST00000532759 944 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AC107958.1-201ENST00000556576 290 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 RPL29P33-201ENST00000587474 316 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AC083899.3-201ENST00000603413 594 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AC011891.2-201ENST00000604949 397 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AC116447.1-201ENST00000613153 453 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AC068213.1-201ENST00000625124 226 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AC010132.4-201ENST00000569883 1368 ntBASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRAIPQ9BWF2 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms