Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 TIMM8BP2-201ENST00000445940 251 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 MRPL35P2-201ENST00000448009 511 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 BX842559.2-201ENST00000451418 605 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AC019084.1-201ENST00000457337 432 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 RN7SL423P-201ENST00000486202 304 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AC114781.3-201ENST00000512083 142 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 RFPL4AP3-201ENST00000515267 345 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 GLRXP2-201ENST00000555594 321 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 IMMP1LP3-201ENST00000604197 224 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AC005252.1-201ENST00000604518 1063 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AL118522.2-201ENST00000616045 615 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 SNX18P1Y-201ENST00000616231 511 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AC244517.3-201ENST00000616254 1235 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AC055839.1-201ENST00000634467 498 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AC114786.1-201ENST00000512892 1415 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC3.84□□□□□ -1.8
AP1S3Q96PC3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
AP1S3Q96PC3 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC3.84□□□□□ -1.8
AP1S3Q96PC3 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
AP1S3Q96PC3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC3.84□□□□□ -1.8
AP1S3Q96PC3 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
AP1S3Q96PC3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC3.84□□□□□ -1.8
AP1S3Q96PC3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC3.84□□□□□ -1.8
AP1S3Q96PC3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
AP1S3Q96PC3 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 DDX18P3-201ENST00000404856 2007 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 HMGB1P20-201ENST00000402555 677 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 RNA5SP146-201ENST00000410743 123 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AC245060.4-201ENST00000413293 1121 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AC073136.2-201ENST00000417282 849 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AL133173.1-201ENST00000423458 397 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AL354893.1-201ENST00000433735 348 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 ZDHHC20P1-204ENST00000435787 423 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 RPL35AP21-201ENST00000437667 333 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AC073109.1-201ENST00000445066 978 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 RNU7-157P-201ENST00000459600 66 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AC091180.1-201ENST00000462104 372 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AC109481.1-201ENST00000509173 282 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AC060775.1-201ENST00000518241 520 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 MYL12AP1-201ENST00000518490 515 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AC105031.1-201ENST00000518550 476 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AC018442.3-201ENST00000523025 183 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AC027369.2-201ENST00000528030 440 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AL356752.1-201ENST00000615844 593 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 CR383656.5-201ENST00000547616 1340 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 VN2R3P-201ENST00000422626 1412 ntBASIC3.83□□□□□ -1.8
AP1S3Q96PC3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
AP1S3Q96PC3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms