Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RNU11-201ENST00000387069 134 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AC104297.1-201ENST00000393779 870 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 MIR1282-201ENST00000408865 101 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 NANOGP9-201ENST00000439890 892 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 RPL5P13-201ENST00000462840 709 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AC084754.1-201ENST00000463466 464 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 UBFD1P1-201ENST00000473259 814 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 BUD31P1-201ENST00000521828 359 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 MTND1P24-201ENST00000552175 861 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 DPPA2P4-201ENST00000563717 878 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AL360012.1-201ENST00000602813 131 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AC021851.1-201ENST00000608537 1082 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AC019131.2-201ENST00000609071 870 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AC084824.4-201ENST00000620106 731 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AC092159.4-201ENST00000624944 550 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AC126544.2-201ENST00000625174 749 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AC083843.2-201ENST00000568248 6253 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AC079298.1-201ENST00000625026 1619 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AC005005.4-201ENST00000623789 16698 ntBASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 RLIMP2-201ENST00000427891 1563 ntBASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 RNU6-796P-201ENST00000391086 107 ntBASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 AL034403.1-201ENST00000399414 885 ntBASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 RPL34P3-201ENST00000421454 338 ntBASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 AC113412.1-201ENST00000425840 504 ntBASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 AC006335.2-201ENST00000437993 330 ntBASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 snoU109.3-201ENST00000459477 145 ntBASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 SNORD125-201ENST00000459538 96 ntBASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 UBE2V1P12-201ENST00000503954 474 ntBASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 SNORD46.2-201ENST00000516021 102 ntBASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 SNORA43.3-201ENST00000517240 103 ntBASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 IGLV3-24-201ENST00000517477 197 ntBASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 AC010476.1-201ENST00000519111 851 ntBASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 AC011492.1-201ENST00000600023 315 ntBASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 AC109809.1-201ENST00000619665 545 ntBASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 AC093875.1-201ENST00000623688 504 ntBASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 AC232271.1-201ENST00000602455 2715 ntBASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 MT-RNR2-201ENST00000387347 1559 ntBASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 SRRM1P3-201ENST00000426911 2678 ntBASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms