Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 EI24P3-201ENST00000399046 1062 ntBASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 RN7SKP213-201ENST00000410746 298 ntBASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 THAP12P8-201ENST00000447914 2115 ntBASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 RPSAP50-201ENST00000481955 852 ntBASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 ENPP7P11-201ENST00000505915 627 ntBASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 OR5M14P-201ENST00000506803 618 ntBASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 AC092490.3-201ENST00000545370 572 ntBASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 AL356752.1-201ENST00000615844 593 ntBASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 AC026367.3-201ENST00000619032 590 ntBASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 AL353684.1-201ENST00000622677 1120 ntBASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 AC068870.3-201ENST00000625077 2536 ntBASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 MIR105-2-201ENST00000385083 81 ntBASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 RN7SKP114-201ENST00000410327 279 ntBASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 RPL12P9-201ENST00000412942 488 ntBASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 RPL23AP27-201ENST00000415161 451 ntBASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 HMGB1P32-201ENST00000425971 565 ntBASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 BX842559.2-201ENST00000451418 605 ntBASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 AC097484.1-201ENST00000471148 389 ntBASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 AC023424.1-201ENST00000496058 459 ntBASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 RN7SL808P-201ENST00000496066 299 ntBASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 AC016559.2-201ENST00000510759 359 ntBASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 AC098976.1-201ENST00000513014 541 ntBASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 AC027308.1-201ENST00000517993 110 ntBASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 HMGN2P6-201ENST00000551091 273 ntBASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 AC022884.2-201ENST00000578535 580 ntBASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 AC009303.3-201ENST00000591103 736 ntBASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 AL445222.1-201ENST00000607259 628 ntBASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 AC009163.6-201ENST00000612367 342 ntBASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
C9orf40Q8IXQ3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
C9orf40Q8IXQ3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
C9orf40Q8IXQ3 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
C9orf40Q8IXQ3 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
C9orf40Q8IXQ3 OR9K1P-202ENST00000641111 3217 ntBASIC4.75□□□□□ -1.65
C9orf40Q8IXQ3 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
C9orf40Q8IXQ3 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
C9orf40Q8IXQ3 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
C9orf40Q8IXQ3 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.75□□□□□ -1.65
C9orf40Q8IXQ3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
C9orf40Q8IXQ3 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
C9orf40Q8IXQ3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
C9orf40Q8IXQ3 SNORA70-201ENST00000384436 135 ntBASIC4.75□□□□□ -1.65
C9orf40Q8IXQ3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
C9orf40Q8IXQ3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.75□□□□□ -1.65
C9orf40Q8IXQ3 AL390316.1-201ENST00000406279 553 ntBASIC4.75□□□□□ -1.65
C9orf40Q8IXQ3 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms