Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 RN7SKP191-201ENST00000364713 306 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 RNA5SP152-201ENST00000365184 110 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 DNAJC19P6-201ENST00000401853 280 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 TXNP7-201ENST00000406296 293 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 AL450338.1-201ENST00000407987 512 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 RN7SKP140-201ENST00000411196 284 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 XKRYP4-201ENST00000414395 483 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 AL022100.1-202ENST00000421214 548 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 AC009965.2-201ENST00000425328 970 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 RPL35AP12-201ENST00000425362 338 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 CHCHD3P1-201ENST00000425516 676 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 FCF1P1-201ENST00000432690 571 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 RPL7P12-201ENST00000446719 750 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 XKRYP5-201ENST00000449659 483 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 AL034369.1-201ENST00000453808 477 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 SNORA81.1-201ENST00000458922 177 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 RN7SL492P-201ENST00000460700 295 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 HMGB1P30-201ENST00000492455 606 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 OR5AP1P-201ENST00000529730 940 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 AC068802.1-201ENST00000603420 732 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 AC019257.2-201ENST00000605539 497 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 RMST_3.1-201ENST00000611651 109 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 AC015722.2-201ENST00000622210 551 ntBASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NPAS3Q8IXF0 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NPAS3Q8IXF0 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC7.4□□□□□ -1.23
NPAS3Q8IXF0 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.4□□□□□ -1.23
NPAS3Q8IXF0 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
NPAS3Q8IXF0 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NPAS3Q8IXF0 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.4□□□□□ -1.23
NPAS3Q8IXF0 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
NPAS3Q8IXF0 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
NPAS3Q8IXF0 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC7.4□□□□□ -1.23
NPAS3Q8IXF0 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC7.4□□□□□ -1.23
NPAS3Q8IXF0 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NPAS3Q8IXF0 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
NPAS3Q8IXF0 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.4□□□□□ -1.23
NPAS3Q8IXF0 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NPAS3Q8IXF0 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NPAS3Q8IXF0 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 AL133320.1-201ENST00000621423 2352 ntBASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 RNU6-353P-201ENST00000364266 108 ntBASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 Y_RNA.231-201ENST00000364358 102 ntBASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 RNU6-1055P-201ENST00000391085 107 ntBASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 RN7SKP254-201ENST00000410685 310 ntBASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 HMGB3P20-201ENST00000417997 600 ntBASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 SPATA20P1-201ENST00000423089 438 ntBASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 RPL23AP50-201ENST00000434149 455 ntBASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 AL050341.1-201ENST00000447743 313 ntBASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 ARPC3P2-201ENST00000457786 533 ntBASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 RNU7-140P-201ENST00000459546 60 ntBASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 AC098818.1-201ENST00000478593 252 ntBASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 RNU6-1137P-201ENST00000517073 99 ntBASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 RN7SKP183-201ENST00000517169 324 ntBASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 LY96-202ENST00000518893 430 ntTSL 3 BASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC7.39□□□□□ -1.23
NPAS3Q8IXF0 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms