Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC073534.2-201ENST00000620377 381 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 AC124312.6-202ENST00000623624 418 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.99□□□□□ -1.45
GFRA1P56159 ATE1-AS1-202ENST00000636460 506 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.99□□□□□ -1.45
GFRA1P56159 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC5.99□□□□□ -1.45
GFRA1P56159 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA1P56159 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC5.99□□□□□ -1.45
GFRA1P56159 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA1P56159 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA1P56159 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC5.99□□□□□ -1.45
GFRA1P56159 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.99□□□□□ -1.45
GFRA1P56159 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA1P56159 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA1P56159 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA1P56159 TATDN2P3-201ENST00000452855 3665 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC5.98□□□□□ -1.45
GFRA1P56159 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 RLIMP2-201ENST00000427891 1563 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.98□□□□□ -1.45
GFRA1P56159 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
GFRA1P56159 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
GFRA1P56159 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 MRPS6P2-201ENST00000381143 370 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 U3.52-201ENST00000384034 216 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 RNU6-1042P-201ENST00000384204 107 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 MIR137-201ENST00000385223 102 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
GFRA1P56159 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
GFRA1P56159 MIR1284-201ENST00000408337 120 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.98□□□□□ -1.45
GFRA1P56159 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.98□□□□□ -1.45
GFRA1P56159 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.98□□□□□ -1.45
GFRA1P56159 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 RPS24P8-201ENST00000431490 402 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 AL513175.1-201ENST00000431492 780 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
GFRA1P56159 AC092601.1-201ENST00000444526 383 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 MTND4P18-201ENST00000447010 465 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.98□□□□□ -1.45
GFRA1P56159 YRDCP3-201ENST00000456507 480 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 RNA5SP269-201ENST00000459032 137 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.98□□□□□ -1.45
GFRA1P56159 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.98□□□□□ -1.45
GFRA1P56159 AC015724.1-201ENST00000478577 156 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.98□□□□□ -1.45
GFRA1P56159 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
GFRA1P56159 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 AC006499.4-201ENST00000510947 694 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.98□□□□□ -1.45
GFRA1P56159 AC106800.2-201ENST00000514009 1103 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 MTCO1P30-201ENST00000515244 580 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.98□□□□□ -1.45
GFRA1P56159 AC125612.1-201ENST00000547580 377 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.98□□□□□ -1.45
GFRA1P56159 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.98□□□□□ -1.45
GFRA1P56159 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.98□□□□□ -1.45
GFRA1P56159 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.98□□□□□ -1.45
GFRA1P56159 AC010487.1-201ENST00000594408 1172 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 Z99129.1-201ENST00000612510 255 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 AC008498.1-201ENST00000613012 531 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 AC025588.4-201ENST00000615802 908 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 MKKS-204ENST00000639674 192 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
GFRA1P56159 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
GFRA1P56159 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 VPS35P1-201ENST00000563400 1518 ntBASIC5.98□□□□□ -1.45
GFRA1P56159 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
GFRA1P56159 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
GFRA1P56159 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.98□□□□□ -1.45
GFRA1P56159 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
GFRA1P56159 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC5.98□□□□□ -1.45
GFRA1P56159 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA1P56159 ZNF658B-201ENST00000602828 3408 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
GFRA1P56159 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA1P56159 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.97□□□□□ -1.45
GFRA1P56159 AC074141.1-201ENST00000588129 2995 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA1P56159 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA1P56159 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.97□□□□□ -1.45
GFRA1P56159 CDR1-202ENST00000625883 1485 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms