Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RN7SL30P-201ENST00000488416 306 ntBASIC5.3□□□□□ -1.56
CDH6P55285 OR4A46P-201ENST00000527255 933 ntBASIC5.3□□□□□ -1.56
CDH6P55285 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH6P55285 MIR4489-201ENST00000578869 62 ntBASIC5.3□□□□□ -1.56
CDH6P55285 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.3□□□□□ -1.56
CDH6P55285 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
CDH6P55285 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH6P55285 SUMO2P15-201ENST00000604285 278 ntBASIC5.3□□□□□ -1.56
CDH6P55285 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
CDH6P55285 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH6P55285 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH6P55285 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH6P55285 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH6P55285 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH6P55285 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH6P55285 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CDH6P55285 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.29□□□□□ -1.56
CDH6P55285 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CDH6P55285 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH6P55285 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH6P55285 MIR223-201ENST00000385204 110 ntBASIC5.29□□□□□ -1.56
CDH6P55285 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH6P55285 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CDH6P55285 RN7SKP126-201ENST00000411143 300 ntBASIC5.29□□□□□ -1.56
CDH6P55285 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH6P55285 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH6P55285 RPL7AP61-201ENST00000443410 636 ntBASIC5.29□□□□□ -1.56
CDH6P55285 AC004980.3-201ENST00000447046 365 ntBASIC5.29□□□□□ -1.56
CDH6P55285 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.29□□□□□ -1.56
CDH6P55285 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH6P55285 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH6P55285 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH6P55285 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH6P55285 NDUFB4P11-201ENST00000560510 395 ntBASIC5.29□□□□□ -1.56
CDH6P55285 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH6P55285 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH6P55285 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.29□□□□□ -1.56
CDH6P55285 MIR6826-201ENST00000617808 98 ntBASIC5.29□□□□□ -1.56
CDH6P55285 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH6P55285 AP000648.2-201ENST00000624182 404 ntBASIC5.29□□□□□ -1.56
CDH6P55285 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.29□□□□□ -1.56
CDH6P55285 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CDH6P55285 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH6P55285 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CDH6P55285 ZNF733P-202ENST00000444809 1573 ntBASIC5.29□□□□□ -1.56
CDH6P55285 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH6P55285 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH6P55285 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH6P55285 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH6P55285 TTC39DP-201ENST00000416781 1688 ntBASIC5.28□□□□□ -1.56
CDH6P55285 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CDH6P55285 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH6P55285 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH6P55285 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH6P55285 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH6P55285 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CDH6P55285 AL353625.1-202ENST00000366273 571 ntBASIC5.28□□□□□ -1.56
CDH6P55285 RN7SKP114-201ENST00000410327 279 ntBASIC5.28□□□□□ -1.56
CDH6P55285 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH6P55285 AC234781.4-201ENST00000419384 244 ntBASIC5.28□□□□□ -1.56
CDH6P55285 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH6P55285 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH6P55285 NANOGP4-201ENST00000427230 913 ntBASIC5.28□□□□□ -1.56
CDH6P55285 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH6P55285 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH6P55285 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.28□□□□□ -1.56
CDH6P55285 VN1R96P-201ENST00000446052 858 ntBASIC5.28□□□□□ -1.56
CDH6P55285 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH6P55285 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH6P55285 FAR2P1-206ENST00000449736 709 ntBASIC5.28□□□□□ -1.56
CDH6P55285 AL389915.2-201ENST00000454576 441 ntBASIC5.28□□□□□ -1.56
CDH6P55285 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH6P55285 RPS26P39-201ENST00000469206 341 ntBASIC5.28□□□□□ -1.56
CDH6P55285 AC079841.1-201ENST00000481228 950 ntBASIC5.28□□□□□ -1.56
CDH6P55285 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
CDH6P55285 OR11I1P-201ENST00000486033 954 ntBASIC5.28□□□□□ -1.56
CDH6P55285 AC011411.1-201ENST00000509592 876 ntBASIC5.28□□□□□ -1.56
CDH6P55285 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH6P55285 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.28□□□□□ -1.56
CDH6P55285 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH6P55285 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH6P55285 AC092111.2-201ENST00000611627 1414 ntBASIC5.28□□□□□ -1.56
CDH6P55285 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH6P55285 HCFC2P1-201ENST00000392864 1592 ntBASIC5.28□□□□□ -1.56
CDH6P55285 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH6P55285 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH6P55285 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH6P55285 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CDH6P55285 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CDH6P55285 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
CDH6P55285 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.27□□□□□ -1.57
CDH6P55285 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH6P55285 SMG1P4-204ENST00000523028 4131 ntBASIC5.27□□□□□ -1.57
CDH6P55285 CR382285.2-201ENST00000624662 1495 ntBASIC5.27□□□□□ -1.57
CDH6P55285 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH6P55285 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH6P55285 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH6P55285 RN7SKP229-201ENST00000410465 302 ntBASIC5.27□□□□□ -1.57
CDH6P55285 RNA5SP296-201ENST00000410523 111 ntBASIC5.27□□□□□ -1.57
CDH6P55285 RNU2-22P-201ENST00000411266 212 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms