Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.79□□□□□ -1.48
GPC3P51654 NPM1P52-201ENST00000518264 846 ntBASIC5.79□□□□□ -1.48
GPC3P51654 AP006245.2-201ENST00000522004 300 ntBASIC5.79□□□□□ -1.48
GPC3P51654 AP002373.2-201ENST00000541631 1060 ntBASIC5.79□□□□□ -1.48
GPC3P51654 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GPC3P51654 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.79□□□□□ -1.48
GPC3P51654 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.79□□□□□ -1.48
GPC3P51654 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.79□□□□□ -1.48
GPC3P51654 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.79□□□□□ -1.48
GPC3P51654 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
GPC3P51654 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.79□□□□□ -1.48
GPC3P51654 AC009597.2-201ENST00000604659 592 ntBASIC5.79□□□□□ -1.48
GPC3P51654 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.79□□□□□ -1.48
GPC3P51654 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
GPC3P51654 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
GPC3P51654 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.79□□□□□ -1.48
GPC3P51654 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.79□□□□□ -1.48
GPC3P51654 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GPC3P51654 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
GPC3P51654 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
GPC3P51654 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GPC3P51654 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
GPC3P51654 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GPC3P51654 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
GPC3P51654 RNU4-4P-201ENST00000364588 130 ntBASIC5.78□□□□□ -1.48
GPC3P51654 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
GPC3P51654 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.78□□□□□ -1.48
GPC3P51654 RNA5SP241-201ENST00000391326 114 ntBASIC5.78□□□□□ -1.48
GPC3P51654 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
GPC3P51654 AL590762.4-201ENST00000425885 253 ntBASIC5.78□□□□□ -1.48
GPC3P51654 RPS4XP16-201ENST00000427198 791 ntBASIC5.78□□□□□ -1.48
GPC3P51654 AL121578.1-201ENST00000428051 892 ntBASIC5.78□□□□□ -1.48
GPC3P51654 AC124944.2-201ENST00000429866 1242 ntBASIC5.78□□□□□ -1.48
GPC3P51654 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.78□□□□□ -1.48
GPC3P51654 VN1R54P-201ENST00000435210 1049 ntBASIC5.78□□□□□ -1.48
GPC3P51654 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.78□□□□□ -1.48
GPC3P51654 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.78□□□□□ -1.48
GPC3P51654 RBMY2TP-201ENST00000451162 947 ntBASIC5.78□□□□□ -1.48
GPC3P51654 RPL7P61-201ENST00000451721 751 ntBASIC5.78□□□□□ -1.48
GPC3P51654 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GPC3P51654 AC012400.1-201ENST00000518452 381 ntBASIC5.78□□□□□ -1.48
GPC3P51654 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GPC3P51654 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.78□□□□□ -1.48
GPC3P51654 AC115989.2-201ENST00000578640 563 ntBASIC5.78□□□□□ -1.48
GPC3P51654 MIR4646-201ENST00000580775 63 ntBASIC5.78□□□□□ -1.48
GPC3P51654 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GPC3P51654 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.78□□□□□ -1.48
GPC3P51654 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
GPC3P51654 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
GPC3P51654 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.48
GPC3P51654 AC131971.1-201ENST00000332881 1482 ntBASIC5.77□□□□□ -1.49
GPC3P51654 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GPC3P51654 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.77□□□□□ -1.49
GPC3P51654 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.77□□□□□ -1.49
GPC3P51654 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GPC3P51654 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GPC3P51654 CASC19-281ENST00000642118 1554 ntBASIC5.77□□□□□ -1.49
GPC3P51654 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GPC3P51654 AC073429.2-201ENST00000569694 1444 ntBASIC5.77□□□□□ -1.49
GPC3P51654 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
GPC3P51654 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GPC3P51654 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GPC3P51654 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GPC3P51654 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
GPC3P51654 Y_RNA.62-201ENST00000362840 99 ntBASIC5.77□□□□□ -1.49
GPC3P51654 MIR1182-201ENST00000408363 97 ntBASIC5.77□□□□□ -1.49
GPC3P51654 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.77□□□□□ -1.49
GPC3P51654 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.77□□□□□ -1.49
GPC3P51654 AL121878.1-201ENST00000418638 859 ntBASIC5.77□□□□□ -1.49
GPC3P51654 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.77□□□□□ -1.49
GPC3P51654 AL136231.1-201ENST00000429407 730 ntBASIC5.77□□□□□ -1.49
GPC3P51654 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.77□□□□□ -1.49
GPC3P51654 AC092647.3-201ENST00000443044 633 ntBASIC5.77□□□□□ -1.49
GPC3P51654 RPS12P31-201ENST00000491419 398 ntBASIC5.77□□□□□ -1.49
GPC3P51654 IMPA1P1-201ENST00000510718 842 ntBASIC5.77□□□□□ -1.49
GPC3P51654 AC022360.1-201ENST00000521058 340 ntBASIC5.77□□□□□ -1.49
GPC3P51654 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.77□□□□□ -1.49
GPC3P51654 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.77□□□□□ -1.49
GPC3P51654 AP000676.2-201ENST00000529711 301 ntBASIC5.77□□□□□ -1.49
GPC3P51654 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.77□□□□□ -1.49
GPC3P51654 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
GPC3P51654 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.77□□□□□ -1.49
GPC3P51654 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.77□□□□□ -1.49
GPC3P51654 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GPC3P51654 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.77□□□□□ -1.49
GPC3P51654 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GPC3P51654 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
GPC3P51654 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.77□□□□□ -1.49
GPC3P51654 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
GPC3P51654 AP001029.2-203ENST00000589795 4910 ntBASIC5.77□□□□□ -1.49
GPC3P51654 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GPC3P51654 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
GPC3P51654 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
GPC3P51654 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
GPC3P51654 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.77□□□□□ -1.49
GPC3P51654 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GPC3P51654 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
GPC3P51654 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
GPC3P51654 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.76□□□□□ -1.49
GPC3P51654 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms