Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC7.02□□□□□ -1.29
NFKB1P19838 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC7.02□□□□□ -1.29
NFKB1P19838 FAM30C-201ENST00000561158 410 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 AC091304.5-201ENST00000568969 158 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 MIR3913-1-201ENST00000577744 102 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NFKB1P19838 AP001004.1-201ENST00000582468 324 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC7.02□□□□□ -1.29
NFKB1P19838 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.02□□□□□ -1.29
NFKB1P19838 AL162730.1-201ENST00000605734 292 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC7.02□□□□□ -1.29
NFKB1P19838 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC7.02□□□□□ -1.29
NFKB1P19838 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.02□□□□□ -1.29
NFKB1P19838 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 AC131009.3-201ENST00000621809 287 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 AC006840.1-201ENST00000623069 542 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NFKB1P19838 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NFKB1P19838 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NFKB1P19838 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NFKB1P19838 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NFKB1P19838 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
NFKB1P19838 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NFKB1P19838 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
NFKB1P19838 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NFKB1P19838 AC110597.1-201ENST00000562669 3176 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 AL022578.1-201ENST00000439330 1433 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
NFKB1P19838 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NFKB1P19838 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.01□□□□□ -1.29
NFKB1P19838 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NFKB1P19838 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NFKB1P19838 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.01□□□□□ -1.29
NFKB1P19838 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NFKB1P19838 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NFKB1P19838 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NFKB1P19838 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
NFKB1P19838 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NFKB1P19838 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.01□□□□□ -1.29
NFKB1P19838 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NFKB1P19838 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
NFKB1P19838 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
NFKB1P19838 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.01□□□□□ -1.29
NFKB1P19838 AC061975.7-201ENST00000592016 2692 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
NFKB1P19838 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
NFKB1P19838 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NFKB1P19838 OR4K15-201ENST00000305051 1216 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NFKB1P19838 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
NFKB1P19838 RNU4-73P-201ENST00000363164 141 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 RNU5D-1-201ENST00000363299 116 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 Y_RNA.295-201ENST00000364918 102 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 PDCL3P5-201ENST00000398028 722 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 CALM2P3-201ENST00000400429 449 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NFKB1P19838 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.01□□□□□ -1.29
NFKB1P19838 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC7.01□□□□□ -1.29
NFKB1P19838 USP9YP13-201ENST00000417797 480 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 AC073464.1-201ENST00000429823 534 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC7.01□□□□□ -1.29
NFKB1P19838 RPL39P6-201ENST00000448289 150 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC7.01□□□□□ -1.29
NFKB1P19838 VDAC2P4-201ENST00000452925 711 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 AL033528.1-201ENST00000453780 140 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC7.01□□□□□ -1.29
NFKB1P19838 HSPE1P22-201ENST00000456856 327 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 CTSLP6-201ENST00000458273 1002 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 RPS4XP19-201ENST00000460237 736 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NFKB1P19838 RN7SL518P-201ENST00000491887 280 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NFKB1P19838 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.01□□□□□ -1.29
NFKB1P19838 NIPA2P2-201ENST00000496376 1083 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC7.01□□□□□ -1.29
NFKB1P19838 AC122714.1-201ENST00000502510 459 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC7.01□□□□□ -1.29
NFKB1P19838 AC108078.1-201ENST00000508073 725 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 AC114786.4-201ENST00000508771 728 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 IMPA1P1-201ENST00000510718 842 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC7.01□□□□□ -1.29
NFKB1P19838 AC087276.1-201ENST00000529659 480 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC7.01□□□□□ -1.29
NFKB1P19838 GTF2IP8-201ENST00000560687 584 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC7.01□□□□□ -1.29
NFKB1P19838 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC7.01□□□□□ -1.29
NFKB1P19838 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC7.01□□□□□ -1.29
NFKB1P19838 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC7.01□□□□□ -1.29
NFKB1P19838 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.01□□□□□ -1.29
NFKB1P19838 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.01□□□□□ -1.29
NFKB1P19838 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NFKB1P19838 AL035410.2-201ENST00000604963 864 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 AC107214.2-201ENST00000608204 634 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 AL590282.1-201ENST00000610379 1136 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 AL121782.1-201ENST00000611242 413 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NFKB1P19838 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 AL139089.1-201ENST00000620372 975 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 AC093909.6-201ENST00000624757 775 ntBASIC7.01□□□□□ -1.29
NFKB1P19838 CLUHP10-201ENST00000631979 980 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms