Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 TMBIM7P-201ENST00000418074 855 ntBASIC4.57□□□□□ -1.68
HLA-DPB1P04440 DSTNP5-201ENST00000427921 523 ntBASIC4.57□□□□□ -1.68
HLA-DPB1P04440 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 RPL7AP61-201ENST00000443410 636 ntBASIC4.57□□□□□ -1.68
HLA-DPB1P04440 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 AC004980.3-201ENST00000447046 365 ntBASIC4.57□□□□□ -1.68
HLA-DPB1P04440 AC005412.2-201ENST00000492004 341 ntBASIC4.57□□□□□ -1.68
HLA-DPB1P04440 AC108693.1-201ENST00000496068 432 ntBASIC4.57□□□□□ -1.68
HLA-DPB1P04440 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 ENPP7P9-201ENST00000514456 627 ntBASIC4.57□□□□□ -1.68
HLA-DPB1P04440 HNRNPRP2-201ENST00000528421 743 ntBASIC4.57□□□□□ -1.68
HLA-DPB1P04440 AC027026.1-201ENST00000532323 742 ntBASIC4.57□□□□□ -1.68
HLA-DPB1P04440 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 RNF138P2-201ENST00000603490 592 ntBASIC4.57□□□□□ -1.68
HLA-DPB1P04440 AC015849.6-201ENST00000605454 474 ntBASIC4.57□□□□□ -1.68
HLA-DPB1P04440 Z95327.3-201ENST00000610385 572 ntBASIC4.57□□□□□ -1.68
HLA-DPB1P04440 AC136428.4-201ENST00000634254 1155 ntBASIC4.57□□□□□ -1.68
HLA-DPB1P04440 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 CASC19-255ENST00000641733 1385 ntBASIC4.56□□□□□ -1.68
HLA-DPB1P04440 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 RN7SKP160-201ENST00000363804 340 ntBASIC4.56□□□□□ -1.68
HLA-DPB1P04440 MIR105-1-201ENST00000385222 81 ntBASIC4.56□□□□□ -1.68
HLA-DPB1P04440 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 AL390774.1-201ENST00000411924 246 ntBASIC4.56□□□□□ -1.68
HLA-DPB1P04440 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 FAM96AP1-201ENST00000430879 482 ntBASIC4.56□□□□□ -1.68
HLA-DPB1P04440 RPL7L1P9-201ENST00000431298 745 ntBASIC4.56□□□□□ -1.68
HLA-DPB1P04440 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 RPS26P4-201ENST00000431743 355 ntBASIC4.56□□□□□ -1.68
HLA-DPB1P04440 CFL1P1-202ENST00000432948 411 ntBASIC4.56□□□□□ -1.68
HLA-DPB1P04440 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 NPM1P48-201ENST00000436002 853 ntBASIC4.56□□□□□ -1.68
HLA-DPB1P04440 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 RPS26P41-201ENST00000450370 284 ntBASIC4.56□□□□□ -1.68
HLA-DPB1P04440 AC104634.1-201ENST00000452720 462 ntBASIC4.56□□□□□ -1.68
HLA-DPB1P04440 AL445433.1-201ENST00000457507 257 ntBASIC4.56□□□□□ -1.68
HLA-DPB1P04440 AL133445.1-201ENST00000467051 452 ntBASIC4.56□□□□□ -1.68
HLA-DPB1P04440 NPM1P29-201ENST00000483112 803 ntBASIC4.56□□□□□ -1.68
HLA-DPB1P04440 AC020890.1-201ENST00000491837 504 ntBASIC4.56□□□□□ -1.68
HLA-DPB1P04440 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 NDUFB4P11-201ENST00000560510 395 ntBASIC4.56□□□□□ -1.68
HLA-DPB1P04440 ADAM3B-201ENST00000569937 840 ntBASIC4.56□□□□□ -1.68
HLA-DPB1P04440 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 AL353684.1-201ENST00000622677 1120 ntBASIC4.56□□□□□ -1.68
HLA-DPB1P04440 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 SAMMSON-209ENST00000641222 1100 ntBASIC4.56□□□□□ -1.68
HLA-DPB1P04440 AC138627.1-204ENST00000641894 765 ntBASIC4.56□□□□□ -1.68
HLA-DPB1P04440 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.56□□□□□ -1.68
HLA-DPB1P04440 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DPB1P04440 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DPB1P04440 RNU6-167P-201ENST00000384292 106 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 MIR143-201ENST00000385300 106 ntBASIC4.55□□□□□ -1.68
HLA-DPB1P04440 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms