Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AL161722.2-201ENST00000434731 981 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 HMGB3P10-201ENST00000434734 572 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 RPL7P33-201ENST00000444159 742 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AL161636.2-201ENST00000445179 927 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AC004980.3-201ENST00000447046 365 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AL445466.1-201ENST00000448432 357 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 RPL21P71-201ENST00000465598 459 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 RN7SL263P-201ENST00000467969 290 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 RPL7AP56-201ENST00000476420 791 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AP000926.1-201ENST00000479573 241 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 DUTP7-201ENST00000507982 486 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AC138517.1-201ENST00000515724 568 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 RNA5SP206-201ENST00000516703 121 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 MAL2-207ENST00000522828 603 ntTSL 3 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 MINCR-206ENST00000524335 499 ntTSL 2 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 HNRNPRP2-201ENST00000528421 743 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 OR8G3P-201ENST00000533406 921 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 CYCSP28-201ENST00000534284 321 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AL109741.3-201ENST00000561748 592 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 CYP4A26P-201ENST00000563017 196 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 MIR4644-201ENST00000579929 84 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 RN7SL708P-201ENST00000580952 299 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 BOLA2P1-201ENST00000584794 232 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AC015911.5-201ENST00000587076 451 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AC244505.7-201ENST00000599675 272 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AC063977.5-201ENST00000601044 974 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 IGKV2OR2-7-201ENST00000604652 304 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AC019322.2-201ENST00000605634 147 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AL445437.1-201ENST00000623157 3087 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AP003400.3-201ENST00000624904 346 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AL357562.1-201ENST00000624911 609 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 CASC19-206ENST00000641028 1430 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 PHKBP1-201ENST00000450951 1951 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 VPS35P1-201ENST00000563400 1518 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
CHKB-CPT1BH3BT56 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
CHKB-CPT1BH3BT56 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.71□□□□□ -1.97
CHKB-CPT1BH3BT56 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 SPATA31D2P-201ENST00000429999 4388 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC008627.1-201ENST00000517511 1704 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 ECM1P2-201ENST00000503354 1577 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 MIR589-201ENST00000385238 99 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC003045.1-201ENST00000398779 713 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 GLS-204ENST00000409428 816 ntTSL 2 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 RNU2-50P-201ENST00000410494 143 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 RN7SKP91-201ENST00000410852 288 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 RN7SKP126-201ENST00000411143 300 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AL357752.1-201ENST00000412817 349 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC00993-201ENST00000420453 540 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 FTH1P6-201ENST00000430768 320 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC01827-201ENST00000432711 555 ntTSL 2 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 CLUHP1-201ENST00000435012 1190 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 COX4I1P2-201ENST00000447446 547 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms