Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 AC108693.1-201ENST00000496068 432 ntBASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 AC093890.1-201ENST00000502554 540 ntBASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 BX510359.5-201ENST00000515651 304 ntBASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 RNA5SP464-201ENST00000516251 108 ntBASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 RPL10P14-201ENST00000565265 298 ntBASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 AC012146.2-201ENST00000576545 416 ntBASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 AC011445.2-201ENST00000599274 173 ntBASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 AC007204.2-201ENST00000615022 616 ntBASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 BX005214.3-202ENST00000619809 325 ntBASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 MIR6839-201ENST00000620425 113 ntBASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 MIR6837-201ENST00000620884 64 ntBASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 CCL14-204ENST00000622526 472 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 AC015660.5-201ENST00000623238 564 ntBASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 AC023421.1-201ENST00000590535 1785 ntBASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 AP001273.1-201ENST00000624493 3152 ntBASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DRB4X5D2U9 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 AC005294.1-201ENST00000355509 281 ntBASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 RNU4-44P-201ENST00000363050 141 ntBASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 SNORA67-201ENST00000384423 137 ntBASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 U3.25-201ENST00000391209 220 ntBASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 RPL36AP10-201ENST00000421785 322 ntBASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 CHEK2P5-201ENST00000423877 246 ntBASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 GAPDHP58-201ENST00000438477 1006 ntBASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 AL591623.2-201ENST00000449978 222 ntBASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 AC104634.1-201ENST00000452720 462 ntBASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 AC011225.1-201ENST00000457751 369 ntBASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 RPL7P39-201ENST00000481157 744 ntBASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 RN7SL814P-201ENST00000487715 300 ntBASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 AC126177.5-201ENST00000549599 178 ntBASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 RN7SL708P-201ENST00000580952 299 ntBASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 MIR4302-201ENST00000638058 60 ntBASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 AL513548.1-201ENST00000562904 1724 ntBASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 AP000542.2-201ENST00000623199 6179 ntBASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 TET1P1-201ENST00000426627 2301 ntBASIC3.92□□□□□ -1.78
HLA-DRB4X5D2U9 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DRB4X5D2U9 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HLA-DRB4X5D2U9 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HLA-DRB4X5D2U9 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DRB4X5D2U9 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DRB4X5D2U9 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HLA-DRB4X5D2U9 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DRB4X5D2U9 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DRB4X5D2U9 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DRB4X5D2U9 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DRB4X5D2U9 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DRB4X5D2U9 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DRB4X5D2U9 MIR589-201ENST00000385238 99 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms