Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC009033.1-201ENST00000624279 431 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 EEF1A1P9-201ENST00000514975 1383 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 CR383658.2-201ENST00000547576 1525 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 RNU6-374P-201ENST00000364146 108 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 ESD-201ENST00000378697 1079 ntTSL 5 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 RN7SKP56-201ENST00000410513 331 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 RANP6-201ENST00000413691 644 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 Z93019.1-201ENST00000416450 973 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AC019050.1-201ENST00000418508 492 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 MTCYBP24-201ENST00000420387 1106 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AC066692.1-201ENST00000421721 457 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 RPS7P12-201ENST00000422385 582 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AC006065.1-201ENST00000422539 802 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 NANOGP4-201ENST00000427230 913 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 RPS25P9-201ENST00000435591 252 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 UBE2V1P3-201ENST00000439651 417 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 GDI2P2-201ENST00000445131 608 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AP000852.1-201ENST00000472460 573 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 UBTFL6-201ENST00000477929 1024 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 IGHVIII-67-4-201ENST00000524281 296 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AC006960.3-201ENST00000561845 705 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 MTCO3P13-201ENST00000577757 781 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AC020914.7-201ENST00000594477 545 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AC245052.7-201ENST00000601161 359 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AL354760.1-201ENST00000608357 643 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AC241377.1-201ENST00000619797 406 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 MIR6811-201ENST00000620409 58 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 Six3os1_1.1-201ENST00000620900 87 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AC018816.2-201ENST00000621460 353 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
ZC3H4Q9UPT8 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AC092821.3-202ENST00000641304 2767 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms