Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
RIMBP3Q9UFD9 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
RIMBP3Q9UFD9 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
RIMBP3Q9UFD9 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
RIMBP3Q9UFD9 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
RIMBP3Q9UFD9 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RIMBP3Q9UFD9 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
RIMBP3Q9UFD9 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RIMBP3Q9UFD9 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 U3.35-201ENST00000408405 208 ntBASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 AC105137.1-201ENST00000484355 562 ntBASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 AC005899.7-201ENST00000618199 588 ntBASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 ACTR3BP2-202ENST00000623630 1338 ntBASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 MIR449B-201ENST00000384995 97 ntBASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 RPL23AP59-201ENST00000399415 461 ntBASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 AC011933.1-201ENST00000413334 321 ntBASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 AL356387.2-201ENST00000422272 243 ntBASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 AC116533.1-201ENST00000459748 321 ntBASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC7.85□□□□□ -1.15
RIMBP3Q9UFD9 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RIMBP3Q9UFD9 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC7.84□□□□□ -1.15
RIMBP3Q9UFD9 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
RIMBP3Q9UFD9 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC7.84□□□□□ -1.15
RIMBP3Q9UFD9 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RIMBP3Q9UFD9 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC7.84□□□□□ -1.15
RIMBP3Q9UFD9 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RIMBP3Q9UFD9 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
RIMBP3Q9UFD9 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RIMBP3Q9UFD9 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
RIMBP3Q9UFD9 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC7.84□□□□□ -1.15
RIMBP3Q9UFD9 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC7.84□□□□□ -1.15
RIMBP3Q9UFD9 AL162591.2-201ENST00000449634 317 ntBASIC7.84□□□□□ -1.15
RIMBP3Q9UFD9 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
RIMBP3Q9UFD9 UQCRHP4-201ENST00000471686 272 ntBASIC7.84□□□□□ -1.15
RIMBP3Q9UFD9 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC7.84□□□□□ -1.15
RIMBP3Q9UFD9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC7.84□□□□□ -1.15
RIMBP3Q9UFD9 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC7.84□□□□□ -1.15
RIMBP3Q9UFD9 AC015908.5-201ENST00000623289 343 ntBASIC7.84□□□□□ -1.15
RIMBP3Q9UFD9 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC7.84□□□□□ -1.15
RIMBP3Q9UFD9 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RIMBP3Q9UFD9 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.16
RIMBP3Q9UFD9 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.16
RIMBP3Q9UFD9 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 MIR491-201ENST00000384877 84 ntBASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 RPL23AP26-201ENST00000412728 464 ntBASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 AL354766.1-201ENST00000423396 542 ntBASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 YY1P1-201ENST00000427625 668 ntBASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 RPS29P17-201ENST00000430795 166 ntBASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 TAAR4P-201ENST00000454843 1039 ntBASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 BNIP3P35-201ENST00000604530 490 ntBASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
RIMBP3Q9UFD9 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RIMBP3Q9UFD9 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC7.82□□□□□ -1.16
RIMBP3Q9UFD9 PDSS1P1-201ENST00000422953 1114 ntBASIC7.82□□□□□ -1.16
RIMBP3Q9UFD9 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC7.82□□□□□ -1.16
RIMBP3Q9UFD9 PANCR-201ENST00000503456 493 ntTSL 5 BASIC7.82□□□□□ -1.16
RIMBP3Q9UFD9 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms