Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RN7SL98P-201ENST00000462271 300 ntBASIC5.04□□□□□ -1.6
CHD7Q9P2D1 UQCRHP4-201ENST00000471686 272 ntBASIC5.04□□□□□ -1.6
CHD7Q9P2D1 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 AC024451.1-201ENST00000508013 779 ntBASIC5.04□□□□□ -1.6
CHD7Q9P2D1 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 AL023881.1-201ENST00000621088 301 ntBASIC5.04□□□□□ -1.6
CHD7Q9P2D1 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 ATP5F1P3-201ENST00000397213 657 ntBASIC5.04□□□□□ -1.6
CHD7Q9P2D1 AL022722.2-201ENST00000402519 180 ntBASIC5.04□□□□□ -1.6
CHD7Q9P2D1 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 RPL23AP2-201ENST00000471227 466 ntBASIC5.04□□□□□ -1.6
CHD7Q9P2D1 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 RN7SL558P-201ENST00000497468 299 ntBASIC5.04□□□□□ -1.6
CHD7Q9P2D1 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 AL627171.1-201ENST00000618845 1308 ntBASIC5.04□□□□□ -1.6
CHD7Q9P2D1 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 SALL4P2-201ENST00000423288 2910 ntBASIC5.04□□□□□ -1.6
CHD7Q9P2D1 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 OR5P1P-201ENST00000299512 925 ntBASIC5.04□□□□□ -1.6
CHD7Q9P2D1 AC008171.1-201ENST00000395058 200 ntBASIC5.04□□□□□ -1.6
CHD7Q9P2D1 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 MIR6075-201ENST00000620782 95 ntBASIC5.04□□□□□ -1.6
CHD7Q9P2D1 AC019206.1-201ENST00000621938 425 ntBASIC5.04□□□□□ -1.6
CHD7Q9P2D1 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 TTC41P-205ENST00000551270 3963 ntBASIC5.04□□□□□ -1.6
CHD7Q9P2D1 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 AC017104.4-201ENST00000636283 1592 ntBASIC5.03□□□□□ -1.6
CHD7Q9P2D1 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 AC090017.1-201ENST00000548612 1779 ntBASIC5.03□□□□□ -1.6
CHD7Q9P2D1 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 RNU1-94P-201ENST00000362627 173 ntBASIC5.03□□□□□ -1.6
CHD7Q9P2D1 AMZ2P2-201ENST00000406819 1057 ntBASIC5.03□□□□□ -1.6
CHD7Q9P2D1 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 RPL7L1P8-201ENST00000469911 741 ntBASIC5.03□□□□□ -1.6
CHD7Q9P2D1 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 AC073358.1-201ENST00000505671 684 ntBASIC5.03□□□□□ -1.6
CHD7Q9P2D1 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 AC084824.2-201ENST00000548906 345 ntBASIC5.03□□□□□ -1.6
CHD7Q9P2D1 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 AC012409.3-201ENST00000611343 981 ntBASIC5.03□□□□□ -1.6
CHD7Q9P2D1 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 AC063976.2-201ENST00000425667 3556 ntBASIC5.03□□□□□ -1.6
CHD7Q9P2D1 AC017019.1-201ENST00000426129 261 ntBASIC5.03□□□□□ -1.6
CHD7Q9P2D1 RPS12P10-201ENST00000427031 377 ntBASIC5.03□□□□□ -1.6
CHD7Q9P2D1 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 AC116562.1-201ENST00000485355 781 ntBASIC5.03□□□□□ -1.6
CHD7Q9P2D1 MTND4LP2-201ENST00000502312 285 ntBASIC5.03□□□□□ -1.6
CHD7Q9P2D1 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 IGHVIII-13-1-201ENST00000517613 291 ntBASIC5.03□□□□□ -1.6
CHD7Q9P2D1 OR8A2P-201ENST00000528631 952 ntBASIC5.03□□□□□ -1.6
CHD7Q9P2D1 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 CASC19-284ENST00000642142 1868 ntBASIC5.03□□□□□ -1.6
CHD7Q9P2D1 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD7Q9P2D1 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.02□□□□□ -1.61
CHD7Q9P2D1 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHD7Q9P2D1 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHD7Q9P2D1 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHD7Q9P2D1 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.02□□□□□ -1.61
CHD7Q9P2D1 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms