Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.95□□□□□ -1.46
BLOC1S4Q9NUP1 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
BLOC1S4Q9NUP1 AL031658.2-201ENST00000616850 651 ntBASIC5.95□□□□□ -1.46
BLOC1S4Q9NUP1 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.95□□□□□ -1.46
BLOC1S4Q9NUP1 AC145207.9-201ENST00000623802 325 ntBASIC5.95□□□□□ -1.46
BLOC1S4Q9NUP1 AC136428.4-201ENST00000634254 1155 ntBASIC5.95□□□□□ -1.46
BLOC1S4Q9NUP1 CASC19-284ENST00000642142 1868 ntBASIC5.95□□□□□ -1.46
BLOC1S4Q9NUP1 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
BLOC1S4Q9NUP1 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.95□□□□□ -1.46
BLOC1S4Q9NUP1 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.95□□□□□ -1.46
BLOC1S4Q9NUP1 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.95□□□□□ -1.46
BLOC1S4Q9NUP1 AC007382.1-201ENST00000624376 2618 ntBASIC5.95□□□□□ -1.46
BLOC1S4Q9NUP1 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 OR9G4-201ENST00000302957 984 ntBASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 AC009804.1-201ENST00000400949 179 ntBASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 RPL19P16-201ENST00000433839 588 ntBASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 CYCSP6-201ENST00000434498 302 ntBASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 SCAND3P1-201ENST00000439854 1060 ntBASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 UBA52P7-201ENST00000486088 380 ntBASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 AC108693.1-201ENST00000496068 432 ntBASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 HMGB1P46-201ENST00000520062 610 ntBASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 HMGB1P40-201ENST00000525121 540 ntBASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 AC027369.5-201ENST00000533838 755 ntBASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 AL162431.4-201ENST00000604674 411 ntBASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 AL096803.3-201ENST00000609032 532 ntBASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 AC079395.2-201ENST00000610982 737 ntBASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 AC083837.1-201ENST00000565297 2994 ntBASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 OR55B1P-203ENST00000641518 2602 ntBASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
BLOC1S4Q9NUP1 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 MIR323A-201ENST00000362199 86 ntBASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 MIR143-201ENST00000385300 106 ntBASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 OR3A2-201ENST00000408891 1076 ntBASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 RN7SKP206-201ENST00000410823 293 ntBASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 AC002524.1-201ENST00000411687 547 ntBASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 CYCSP11-201ENST00000436426 315 ntBASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 CACYBPP1-201ENST00000438592 684 ntBASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 AL035551.1-201ENST00000446931 348 ntBASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 AC016724.1-201ENST00000453215 421 ntBASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 AC108161.1-201ENST00000461060 402 ntBASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 AC096741.1-201ENST00000472250 846 ntBASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 RPL7P41-201ENST00000485823 957 ntBASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 RN7SL814P-201ENST00000487715 300 ntBASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 NMNAT1P5-201ENST00000559657 841 ntBASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 AC011445.2-201ENST00000599274 173 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms