Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AC007342.7-201ENST00000624610 2337 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 RPL7P58-201ENST00000402913 758 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 GLS-204ENST00000409428 816 ntTSL 2 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 RN7SKP129-201ENST00000410288 299 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AC023128.2-201ENST00000420880 1223 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 CENPIP1-201ENST00000425713 902 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AC092641.1-201ENST00000440229 772 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 MTCO1P19-201ENST00000443487 500 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AC104339.1-201ENST00000465478 348 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AL355032.1-201ENST00000472981 438 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 ARL4AP1-201ENST00000503220 705 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AC005178.1-201ENST00000508392 440 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AC093816.1-201ENST00000515076 913 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AC022447.1-201ENST00000515358 464 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 HIGD1AP10-201ENST00000527837 282 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AC007068.2-201ENST00000543168 395 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 HNRNPCP1-201ENST00000556181 766 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 CASC16-202ENST00000563844 610 ntTSL 3 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AC234778.2-201ENST00000566241 354 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AC090651.1-201ENST00000567865 634 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AC107982.3-201ENST00000584957 985 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 MIR4999-201ENST00000585029 91 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AC015722.2-201ENST00000622210 551 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 BIN2P1-201ENST00000504996 1530 ntBASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXP3Q9BZS1 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 BRAFP1-201ENST00000445336 2703 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 Y_RNA.560-201ENST00000384689 102 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 MTND4LP20-201ENST00000402379 270 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 RPL5P20-201ENST00000403848 896 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms