Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 RPL36AP36-201ENST00000418616 301 ntBASIC6.44□□□□□ -1.38
SHANK3Q9BYB0 CBX1P1-201ENST00000440184 427 ntBASIC6.44□□□□□ -1.38
SHANK3Q9BYB0 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.44□□□□□ -1.38
SHANK3Q9BYB0 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.44□□□□□ -1.38
SHANK3Q9BYB0 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.44□□□□□ -1.38
SHANK3Q9BYB0 RN7SKP92-201ENST00000517266 244 ntBASIC6.44□□□□□ -1.38
SHANK3Q9BYB0 OR4A6P-201ENST00000534364 970 ntBASIC6.44□□□□□ -1.38
SHANK3Q9BYB0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC6.44□□□□□ -1.38
SHANK3Q9BYB0 AC007224.1-201ENST00000564410 144 ntBASIC6.44□□□□□ -1.38
SHANK3Q9BYB0 MIR7853-201ENST00000584820 132 ntBASIC6.44□□□□□ -1.38
SHANK3Q9BYB0 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.44□□□□□ -1.38
SHANK3Q9BYB0 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.44□□□□□ -1.38
SHANK3Q9BYB0 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHANK3Q9BYB0 AC125257.1-201ENST00000560400 2930 ntBASIC6.44□□□□□ -1.38
SHANK3Q9BYB0 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHANK3Q9BYB0 CASC19-255ENST00000641733 1385 ntBASIC6.44□□□□□ -1.38
SHANK3Q9BYB0 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHANK3Q9BYB0 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 RNU4-39P-201ENST00000362455 127 ntBASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 SNORD113.2-201ENST00000364166 89 ntBASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 SNORA70.10-201ENST00000384515 134 ntBASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 Z97832.1-201ENST00000402490 328 ntBASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 RPL12P43-201ENST00000420608 499 ntBASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 GLUD1P9-201ENST00000420997 1173 ntBASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 SAP18P1-201ENST00000512058 390 ntBASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 RNA5SP464-201ENST00000516251 108 ntBASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 MTCYBP13-201ENST00000578634 1093 ntBASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 AC023575.1-201ENST00000580510 358 ntBASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 AC009951.1-201ENST00000623674 2614 ntBASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 MTCO1P15-201ENST00000529569 1526 ntBASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.43□□□□□ -1.38
SHANK3Q9BYB0 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 AL442639.1-201ENST00000625030 1899 ntBASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 AL445189.1-201ENST00000405722 338 ntBASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 RPL21P108-201ENST00000413857 481 ntBASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 AC046176.1-201ENST00000435260 1170 ntBASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 PSAT1P4-201ENST00000466500 526 ntBASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 DSTNP2-201ENST00000504533 515 ntBASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 RPL12P25-202ENST00000598100 674 ntBASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 AC007786.3-201ENST00000615154 596 ntBASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 AC087821.1-201ENST00000623639 567 ntBASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 AC112200.1-201ENST00000625015 234 ntBASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 AL390316.1-201ENST00000406279 553 ntBASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 AK3P4-201ENST00000504283 583 ntBASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 NPM1P6-201ENST00000521088 871 ntBASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 MIR5699-201ENST00000578903 90 ntBASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 AC004232.3-201ENST00000622977 525 ntBASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms