Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 RNA5SP191-201ENST00000362585 102 ntBASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 RPL7P57-201ENST00000423238 740 ntBASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 AC016772.1-201ENST00000444170 1261 ntBASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 AL513533.1-201ENST00000453728 415 ntBASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 AC079168.2-201ENST00000453977 416 ntBASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 RN7SL346P-201ENST00000491561 294 ntBASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 AC025164.1-201ENST00000496249 478 ntBASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 OR5AN2P-201ENST00000534535 896 ntBASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 AC008033.2-201ENST00000542626 177 ntBASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 AL512310.9-201ENST00000553311 948 ntBASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 OR9K1P-202ENST00000641111 3217 ntBASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CDK5RAP2Q96SN8 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 RPL12P9-201ENST00000412942 488 ntBASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 QRSL1P2-201ENST00000418582 964 ntBASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 USP9YP9-201ENST00000429406 715 ntBASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 RPL5P2-201ENST00000429598 854 ntBASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 TPT1P12-201ENST00000448968 492 ntBASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 OR52J1P-201ENST00000450596 932 ntBASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 CEACAMP10-202ENST00000495431 496 ntBASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 AC016559.2-201ENST00000510759 359 ntBASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 MIR5699-201ENST00000578903 90 ntBASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 AP001153.1-201ENST00000641024 338 ntBASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 AP000473.2-201ENST00000602659 1537 ntBASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP2Q96SN8 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 SNORA70.10-201ENST00000384515 134 ntBASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 RPL12P43-201ENST00000420608 499 ntBASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 AC009238.2-201ENST00000431026 355 ntBASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 AC011487.3-201ENST00000593607 453 ntBASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 AC010424.2-201ENST00000607594 443 ntBASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 AP001521.2-201ENST00000608772 546 ntBASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 AC091932.2-201ENST00000623014 291 ntBASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 NCLP2-201ENST00000416078 1462 ntBASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 SOCS5P3-201ENST00000425115 1576 ntBASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDK5RAP2Q96SN8 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms