Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC009597.2-201ENST00000604659 592 ntBASIC3.86□□□□□ -1.79
AP1S3Q96PC3 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 AC132825.8-201ENST00000640783 297 ntBASIC3.86□□□□□ -1.79
AP1S3Q96PC3 AC073869.10-201ENST00000642016 354 ntBASIC3.86□□□□□ -1.79
AP1S3Q96PC3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 AC063976.2-201ENST00000425667 3556 ntBASIC3.86□□□□□ -1.79
AP1S3Q96PC3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AC007382.1-201ENST00000624376 2618 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 SRRM1P3-201ENST00000426911 2678 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 OR7E25P-201ENST00000344844 931 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AC005294.1-201ENST00000355509 281 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 RNU4-2-201ENST00000365668 141 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AC007068.1-201ENST00000396690 844 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 RPL21P108-201ENST00000413857 481 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AC009237.10-201ENST00000414112 510 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 OR2X1P-201ENST00000421144 687 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 BX323845.3-201ENST00000428215 527 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AL161722.2-201ENST00000434731 981 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AL512637.1-201ENST00000439523 1231 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 ARL4AP3-201ENST00000441452 574 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AC239798.3-201ENST00000454459 408 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 RN7SL189P-201ENST00000468631 289 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AP002884.1-201ENST00000479691 655 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 NIFKP7-201ENST00000503365 834 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 HMGB1P44-201ENST00000508597 572 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AC021146.3-201ENST00000511911 260 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AF186190.1-201ENST00000517470 480 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 BTG1P1-201ENST00000540396 508 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AC079600.1-201ENST00000550326 297 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 MIR4675-201ENST00000577898 77 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AP002884.5-201ENST00000595053 1132 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AC018695.5-201ENST00000605872 315 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AL158196.1-201ENST00000616786 434 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AC009704.2-201ENST00000618739 483 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 BX005214.3-202ENST00000619809 325 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 SALL4P2-201ENST00000423288 2910 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AC006210.2-201ENST00000367074 1545 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
AP1S3Q96PC3 AC091046.3-201ENST00000631455 1574 ntBASIC3.85□□□□□ -1.79
AP1S3Q96PC3 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AC107027.3-201ENST00000565095 3473 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 OR56A4-201ENST00000330728 1209 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 RNU1-65P-201ENST00000363919 148 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 OR2AT2P-201ENST00000413438 905 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC3.84□□□□□ -1.79
AP1S3Q96PC3 GSTM5P1-201ENST00000434751 660 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AMYP1-201ENST00000440059 1023 ntBASIC3.84□□□□□ -1.79
AP1S3Q96PC3 AC005297.1-201ENST00000444765 862 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms