Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 SNORA48.4-201ENST00000391089 134 ntBASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AC233289.1-201ENST00000403700 508 ntBASIC5.25□□□□□ -1.57
VPS33AQ96AX1 UBE2V1P15-201ENST00000407776 448 ntBASIC5.25□□□□□ -1.57
VPS33AQ96AX1 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 RNA5SP296-201ENST00000410523 111 ntBASIC5.25□□□□□ -1.57
VPS33AQ96AX1 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 OR6C64P-201ENST00000419708 825 ntBASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 HMGB3P24-201ENST00000433260 622 ntBASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AC007679.3-201ENST00000434035 414 ntBASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AMYP1-201ENST00000440059 1023 ntBASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AL691517.1-201ENST00000440833 1235 ntBASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AC243772.1-201ENST00000451620 410 ntBASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AP000797.2-201ENST00000475768 606 ntBASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AC114781.3-201ENST00000512083 142 ntBASIC5.25□□□□□ -1.57
VPS33AQ96AX1 HMGN1P9-201ENST00000515212 298 ntBASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 SETP1-201ENST00000556014 845 ntBASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 OR4H6P-202ENST00000603819 340 ntBASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AC025574.2-201ENST00000615621 514 ntBASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AC073869.8-201ENST00000641806 335 ntBASIC5.25□□□□□ -1.57
VPS33AQ96AX1 CASC19-274ENST00000642018 970 ntBASIC5.25□□□□□ -1.57
VPS33AQ96AX1 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 BX005019.1-201ENST00000561881 1810 ntBASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 OR9K1P-201ENST00000326513 941 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 ATP5HP3-201ENST00000396994 486 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 RPL7AP49-201ENST00000429522 581 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 MTCO3P21-201ENST00000430791 643 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 AL591438.1-201ENST00000433508 581 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 FHP1-201ENST00000442741 703 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 AC016772.1-201ENST00000444170 1261 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 AL358876.1-201ENST00000453364 1075 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 RPL7AP52-201ENST00000458096 790 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 AC007688.1-201ENST00000475592 759 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 RPL21P6-201ENST00000479171 504 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 AC022215.1-201ENST00000481770 362 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 LSM3P4-201ENST00000502948 309 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 SETP12-201ENST00000514068 805 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 RNU6-1004P-201ENST00000516584 111 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 SCARNA20.4-201ENST00000516969 131 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 OR8G3P-201ENST00000533406 921 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 DPPA2P4-201ENST00000563717 878 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 MIR5010-201ENST00000582846 120 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 AP000769.2-201ENST00000602344 396 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 AC012557.1-201ENST00000607115 611 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 AC011472.4-201ENST00000615848 491 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 AL683826.1-201ENST00000624104 627 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 AC107027.3-201ENST00000565095 3473 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 AC073136.1-201ENST00000449426 2884 ntBASIC5.24□□□□□ -1.57
VPS33AQ96AX1 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS33AQ96AX1 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms