Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ZNF439Q8NDP4 NAMPTP1-201ENST00000440465 2514 ntBASIC4.3□□□□□ -1.72
ZNF439Q8NDP4 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
ZNF439Q8NDP4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZNF439Q8NDP4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AC022417.1-201ENST00000624768 1303 ntBASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AC092747.4-201ENST00000620519 1861 ntBASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 RNA5SP183-201ENST00000362452 119 ntBASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 RNA5SP242-201ENST00000364171 118 ntBASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 MIR105-1-201ENST00000385222 81 ntBASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 MIR143-201ENST00000385300 106 ntBASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 RNU1-149P-201ENST00000390870 161 ntBASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AC009804.1-201ENST00000400949 179 ntBASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AL161722.2-201ENST00000434731 981 ntBASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 BX842559.2-201ENST00000451418 605 ntBASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 SETP20-201ENST00000457046 852 ntBASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AP000942.1-201ENST00000463969 747 ntBASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 RN7SL189P-201ENST00000468631 289 ntBASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 RPL7P51-201ENST00000490532 749 ntBASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 RNA5SP362-201ENST00000516048 118 ntBASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AC008126.1-201ENST00000549019 480 ntBASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ZNF439Q8NDP4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 U3.3-201ENST00000362986 216 ntBASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 GAPDHP15-201ENST00000398586 975 ntBASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 AL513325.1-201ENST00000417716 1034 ntBASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 AC013470.3-201ENST00000420252 1194 ntBASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 NPM1P33-201ENST00000438918 872 ntBASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 AC007386.1-201ENST00000455212 582 ntBASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 TPT1P1-201ENST00000458495 518 ntBASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 RPL21P6-201ENST00000479171 504 ntBASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 AC100784.1-201ENST00000522790 310 ntBASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 AC096553.1-201ENST00000605169 829 ntBASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 AP005131.7-201ENST00000610087 611 ntBASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 AC118658.2-201ENST00000618697 459 ntBASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms