Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 AC123912.3-201ENST00000600907 1367 ntBASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 AC245100.2-201ENST00000454544 1679 ntBASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 OR13C1P-202ENST00000641378 2919 ntBASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 RNA5SP319-201ENST00000362768 119 ntBASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 AC239798.3-201ENST00000454459 408 ntBASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 AC020779.1-201ENST00000478757 796 ntBASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 AC234775.3-201ENST00000564612 656 ntBASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 AC015720.2-201ENST00000567709 334 ntBASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 AC126323.6-202ENST00000568092 3511 ntBASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.06□□□□□ -1.6
NUDCD3Q8IVD9 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 AL589994.1-201ENST00000404962 340 ntBASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 RN7SKP240-201ENST00000410583 375 ntBASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 PTP4A1P1-201ENST00000420539 515 ntBASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 AC002504.1-201ENST00000438281 691 ntBASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 RN7SKP46-201ENST00000515942 234 ntBASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 HNRNPRP2-201ENST00000528421 743 ntBASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 AC008126.1-201ENST00000549019 480 ntBASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 MIR8069-1-201ENST00000616627 86 ntBASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 MIR8069-2-201ENST00000621412 86 ntBASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 AC074101.1-201ENST00000637861 241 ntBASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUDCD3Q8IVD9 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 MIR621-201ENST00000384919 96 ntBASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 SUMO2P3-201ENST00000438311 288 ntBASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 AC098583.1-201ENST00000480875 255 ntBASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 RN7SL441P-201ENST00000492388 296 ntBASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 RN7SL591P-201ENST00000496150 292 ntBASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 EIF4A2P5-201ENST00000529914 499 ntBASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 AC005868.1-201ENST00000536421 331 ntBASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms