Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AL031595.2-201ENST00000624215 19071 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 RNU6-386P-201ENST00000362650 107 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 SNORA27.3-201ENST00000364937 134 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 RNU4-2-201ENST00000365668 141 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 RNA5SP187-201ENST00000384400 119 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 TRAV35-201ENST00000390462 330 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 TNPO1P1-201ENST00000423641 1138 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 SRSF1P1-201ENST00000424058 520 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 AC092634.2-201ENST00000428146 1010 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 AC079807.1-201ENST00000429993 481 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 RPS26P41-201ENST00000450370 284 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 RN7SKP265-201ENST00000516448 223 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 OR7E13P-201ENST00000526052 910 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 DUXAP5-201ENST00000529668 529 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 AP004607.2-201ENST00000533949 322 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 CKS1BP1-201ENST00000555221 240 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 RNA5SP440-201ENST00000612665 119 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 RN7SL787P-201ENST00000613000 284 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 AC068880.4-201ENST00000623082 495 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 AC018628.1-201ENST00000624147 3819 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 AC119674.1-220ENST00000641502 1048 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 AL078621.3-201ENST00000623707 2042 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 AC006600.2-201ENST00000624834 2506 ntBASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
ZNF549Q6P9A3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 RNA5SP234-201ENST00000363916 119 ntBASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 MTND2P16-201ENST00000419987 799 ntBASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 RPL7AP49-201ENST00000429522 581 ntBASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 RPS29P14-201ENST00000431518 171 ntBASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 AL591438.1-201ENST00000433508 581 ntBASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 AL645931.1-201ENST00000439737 410 ntBASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 Z77249.1-201ENST00000444622 1175 ntBASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 AC073909.1-201ENST00000447112 999 ntBASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 RANP1-206ENST00000455094 651 ntBASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 AC092754.1-201ENST00000472975 479 ntBASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 NAMPTP2-201ENST00000505629 1115 ntBASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 PRELID3BP5-201ENST00000508612 460 ntBASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 AC112191.2-201ENST00000522428 333 ntBASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 EEF1A1P37-201ENST00000522748 715 ntBASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 AC091515.1-201ENST00000548110 679 ntBASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms