Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FNDC3BQ53EP0 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
FNDC3BQ53EP0 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FNDC3BQ53EP0 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
FNDC3BQ53EP0 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
FNDC3BQ53EP0 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.31□□□□□ -1.4
FNDC3BQ53EP0 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FNDC3BQ53EP0 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
FNDC3BQ53EP0 GUCY1B2-204ENST00000531898 1979 ntBASIC6.31□□□□□ -1.4
FNDC3BQ53EP0 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
FNDC3BQ53EP0 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
FNDC3BQ53EP0 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.31□□□□□ -1.4
FNDC3BQ53EP0 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
FNDC3BQ53EP0 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FNDC3BQ53EP0 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 VPS35P1-201ENST00000563400 1518 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 MTND4P22-201ENST00000413116 1169 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 USP9YP26-201ENST00000421008 661 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AC066692.1-201ENST00000421721 457 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 GTF2IP23-201ENST00000423746 351 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 CUBNP2-201ENST00000443534 1139 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AC104971.1-201ENST00000495117 578 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AC093755.1-201ENST00000512950 1023 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 RNA5SP340-201ENST00000517132 107 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 HMGB1P23-201ENST00000518743 568 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 TRIM77BP-201ENST00000524985 1119 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AC092747.2-201ENST00000545069 983 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AP000619.2-201ENST00000546014 969 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AL121579.2-201ENST00000555466 590 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AC080013.3-201ENST00000606839 578 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AC245008.1-201ENST00000608123 476 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AC024255.1-201ENST00000614376 102 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AC129778.1-202ENST00000623812 261 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AL591379.1-207ENST00000635982 261 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AC103706.2-201ENST00000638080 240 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 AC008627.1-201ENST00000517511 1704 ntBASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
FNDC3BQ53EP0 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 OR1L1-202ENST00000373686 1083 ntBASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 RN7SKP59-201ENST00000410520 314 ntBASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 HMGN1P20-201ENST00000411849 300 ntBASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.29□□□□□ -1.4
FNDC3BQ53EP0 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms