Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MIR7109-201ENST00000613748 65 ntBASIC5.65□□□□□ -1.5
TPM4P67936 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.65□□□□□ -1.5
TPM4P67936 AC073593.1-201ENST00000624500 411 ntBASIC5.65□□□□□ -1.5
TPM4P67936 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.65□□□□□ -1.5
TPM4P67936 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TPM4P67936 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
TPM4P67936 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.65□□□□□ -1.51
TPM4P67936 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
TPM4P67936 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TPM4P67936 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.65□□□□□ -1.51
TPM4P67936 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TPM4P67936 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TPM4P67936 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
TPM4P67936 U3.3-201ENST00000362986 216 ntBASIC5.64□□□□□ -1.51
TPM4P67936 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TPM4P67936 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.64□□□□□ -1.51
TPM4P67936 RNU1-149P-201ENST00000390870 161 ntBASIC5.64□□□□□ -1.51
TPM4P67936 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.64□□□□□ -1.51
TPM4P67936 AC104843.2-201ENST00000427666 297 ntBASIC5.64□□□□□ -1.51
TPM4P67936 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.64□□□□□ -1.51
TPM4P67936 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.64□□□□□ -1.51
TPM4P67936 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TPM4P67936 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TPM4P67936 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.64□□□□□ -1.51
TPM4P67936 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.64□□□□□ -1.51
TPM4P67936 GTF2F2P1-201ENST00000511083 675 ntBASIC5.64□□□□□ -1.51
TPM4P67936 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.64□□□□□ -1.51
TPM4P67936 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.64□□□□□ -1.51
TPM4P67936 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.64□□□□□ -1.51
TPM4P67936 HNRNPRP2-201ENST00000528421 743 ntBASIC5.64□□□□□ -1.51
TPM4P67936 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.64□□□□□ -1.51
TPM4P67936 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.64□□□□□ -1.51
TPM4P67936 RPL10P14-201ENST00000565265 298 ntBASIC5.64□□□□□ -1.51
TPM4P67936 CYCSP40-201ENST00000575927 294 ntBASIC5.64□□□□□ -1.51
TPM4P67936 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.64□□□□□ -1.51
TPM4P67936 AL096712.1-201ENST00000614561 159 ntBASIC5.64□□□□□ -1.51
TPM4P67936 AC132825.8-201ENST00000640783 297 ntBASIC5.64□□□□□ -1.51
TPM4P67936 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TPM4P67936 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TPM4P67936 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TPM4P67936 AC068446.1-201ENST00000556425 1549 ntBASIC5.64□□□□□ -1.51
TPM4P67936 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TPM4P67936 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.63□□□□□ -1.51
TPM4P67936 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TPM4P67936 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TPM4P67936 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.63□□□□□ -1.51
TPM4P67936 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
TPM4P67936 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
TPM4P67936 SLC35E1P1-201ENST00000419313 864 ntBASIC5.63□□□□□ -1.51
TPM4P67936 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.63□□□□□ -1.51
TPM4P67936 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.63□□□□□ -1.51
TPM4P67936 FAM96AP1-201ENST00000430879 482 ntBASIC5.63□□□□□ -1.51
TPM4P67936 RPS26P4-201ENST00000431743 355 ntBASIC5.63□□□□□ -1.51
TPM4P67936 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.63□□□□□ -1.51
TPM4P67936 TXNP5-201ENST00000441043 315 ntBASIC5.63□□□□□ -1.51
TPM4P67936 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.63□□□□□ -1.51
TPM4P67936 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
TPM4P67936 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TPM4P67936 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.63□□□□□ -1.51
TPM4P67936 RNA5SP373-201ENST00000517271 95 ntBASIC5.63□□□□□ -1.51
TPM4P67936 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.63□□□□□ -1.51
TPM4P67936 AC005868.1-201ENST00000536421 331 ntBASIC5.63□□□□□ -1.51
TPM4P67936 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TPM4P67936 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.63□□□□□ -1.51
TPM4P67936 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.63□□□□□ -1.51
TPM4P67936 AC000123.3-201ENST00000624029 4975 ntBASIC5.63□□□□□ -1.51
TPM4P67936 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TPM4P67936 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.63□□□□□ -1.51
TPM4P67936 AL359922.3-201ENST00000624779 1670 ntBASIC5.63□□□□□ -1.51
TPM4P67936 AC027290.2-201ENST00000623210 18662 ntBASIC5.62□□□□□ -1.51
TPM4P67936 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TPM4P67936 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.62□□□□□ -1.51
TPM4P67936 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
TPM4P67936 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TPM4P67936 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TPM4P67936 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TPM4P67936 SNORA73.1-201ENST00000363107 205 ntBASIC5.62□□□□□ -1.51
TPM4P67936 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.62□□□□□ -1.51
TPM4P67936 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TPM4P67936 AP000580.1-201ENST00000404439 358 ntBASIC5.62□□□□□ -1.51
TPM4P67936 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.62□□□□□ -1.51
TPM4P67936 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.62□□□□□ -1.51
TPM4P67936 AL358176.3-201ENST00000420757 454 ntBASIC5.62□□□□□ -1.51
TPM4P67936 NMNAT1P2-201ENST00000435192 860 ntBASIC5.62□□□□□ -1.51
TPM4P67936 MRPL48P1-201ENST00000445390 636 ntBASIC5.62□□□□□ -1.51
TPM4P67936 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.62□□□□□ -1.51
TPM4P67936 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.62□□□□□ -1.51
TPM4P67936 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.62□□□□□ -1.51
TPM4P67936 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.62□□□□□ -1.51
TPM4P67936 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.62□□□□□ -1.51
TPM4P67936 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.62□□□□□ -1.51
TPM4P67936 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.62□□□□□ -1.51
TPM4P67936 AP000859.1-201ENST00000525536 307 ntBASIC5.62□□□□□ -1.51
TPM4P67936 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.62□□□□□ -1.51
TPM4P67936 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.62□□□□□ -1.51
TPM4P67936 AC107958.1-201ENST00000556576 290 ntBASIC5.62□□□□□ -1.51
TPM4P67936 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.62□□□□□ -1.51
TPM4P67936 MIR1273E-201ENST00000581165 102 ntBASIC5.62□□□□□ -1.51
TPM4P67936 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.62□□□□□ -1.51
TPM4P67936 RN7SL52P-201ENST00000584271 284 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms