Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AL390774.1-201ENST00000411924 246 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 SETP15-201ENST00000412724 337 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.01□□□□□ -1.61
PKNOX1P55347 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.01□□□□□ -1.61
PKNOX1P55347 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.01□□□□□ -1.61
PKNOX1P55347 AC093655.2-201ENST00000425735 631 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 AL139148.1-201ENST00000427122 680 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 FAM96AP1-201ENST00000430879 482 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 GAPDHP34-201ENST00000432112 823 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 AP000281.1-201ENST00000444036 316 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 AL161636.2-201ENST00000445179 927 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.01□□□□□ -1.61
PKNOX1P55347 AC091180.1-201ENST00000462104 372 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.01□□□□□ -1.61
PKNOX1P55347 AC073073.1-201ENST00000493920 463 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.01□□□□□ -1.61
PKNOX1P55347 RNU6-941P-201ENST00000516346 108 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.01□□□□□ -1.61
PKNOX1P55347 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.01□□□□□ -1.61
PKNOX1P55347 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.01□□□□□ -1.61
PKNOX1P55347 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
PKNOX1P55347 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.01□□□□□ -1.61
PKNOX1P55347 AC126177.5-201ENST00000549599 178 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 NDUFA5P11-201ENST00000567995 343 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 AP005262.1-201ENST00000582646 997 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 RN7SL435P-201ENST00000584418 282 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.01□□□□□ -1.61
PKNOX1P55347 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.01□□□□□ -1.61
PKNOX1P55347 AC015914.2-201ENST00000618167 288 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.01□□□□□ -1.61
PKNOX1P55347 AC007996.1-201ENST00000620414 2821 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.01□□□□□ -1.61
PKNOX1P55347 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PKNOX1P55347 AC126323.6-202ENST00000568092 3511 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5□□□□□ -1.61
PKNOX1P55347 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PKNOX1P55347 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PKNOX1P55347 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5□□□□□ -1.61
PKNOX1P55347 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5□□□□□ -1.61
PKNOX1P55347 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
PKNOX1P55347 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
PKNOX1P55347 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
PKNOX1P55347 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5□□□□□ -1.61
PKNOX1P55347 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5□□□□□ -1.61
PKNOX1P55347 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
PKNOX1P55347 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PKNOX1P55347 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PKNOX1P55347 CDC27P2-201ENST00000425026 1922 ntBASIC5□□□□□ -1.61
PKNOX1P55347 TMSB4XP4-201ENST00000323496 618 ntBASIC5□□□□□ -1.61
PKNOX1P55347 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5□□□□□ -1.61
PKNOX1P55347 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5□□□□□ -1.61
PKNOX1P55347 RN7SKP74-201ENST00000362849 309 ntBASIC5□□□□□ -1.61
PKNOX1P55347 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5□□□□□ -1.61
PKNOX1P55347 RNU1-77P-201ENST00000390868 162 ntBASIC5□□□□□ -1.61
PKNOX1P55347 AL589994.1-201ENST00000404962 340 ntBASIC5□□□□□ -1.61
PKNOX1P55347 RPS4XP16-201ENST00000427198 791 ntBASIC5□□□□□ -1.61
PKNOX1P55347 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5□□□□□ -1.61
PKNOX1P55347 CYCSP6-201ENST00000434498 302 ntBASIC5□□□□□ -1.61
PKNOX1P55347 CYCSP12-201ENST00000437729 300 ntBASIC5□□□□□ -1.61
PKNOX1P55347 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5□□□□□ -1.61
PKNOX1P55347 AC004980.3-201ENST00000447046 365 ntBASIC5□□□□□ -1.61
PKNOX1P55347 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
PKNOX1P55347 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5□□□□□ -1.61
PKNOX1P55347 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5□□□□□ -1.61
PKNOX1P55347 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5□□□□□ -1.61
PKNOX1P55347 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5□□□□□ -1.61
PKNOX1P55347 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5□□□□□ -1.61
PKNOX1P55347 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
PKNOX1P55347 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5□□□□□ -1.61
PKNOX1P55347 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5□□□□□ -1.61
PKNOX1P55347 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5□□□□□ -1.61
PKNOX1P55347 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5□□□□□ -1.61
PKNOX1P55347 AC015871.5-202ENST00000623252 701 ntBASIC5□□□□□ -1.61
PKNOX1P55347 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5□□□□□ -1.61
PKNOX1P55347 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5□□□□□ -1.61
PKNOX1P55347 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5□□□□□ -1.61
PKNOX1P55347 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5□□□□□ -1.61
PKNOX1P55347 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5□□□□□ -1.61
PKNOX1P55347 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5□□□□□ -1.61
PKNOX1P55347 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PKNOX1P55347 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.99□□□□□ -1.61
PKNOX1P55347 AC092111.2-201ENST00000611627 1414 ntBASIC4.99□□□□□ -1.61
PKNOX1P55347 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PKNOX1P55347 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
PKNOX1P55347 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
PKNOX1P55347 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PKNOX1P55347 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.99□□□□□ -1.61
PKNOX1P55347 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PKNOX1P55347 AC013429.2-201ENST00000418798 781 ntBASIC4.99□□□□□ -1.61
PKNOX1P55347 VN1R3-201ENST00000418822 919 ntBASIC4.99□□□□□ -1.61
PKNOX1P55347 NPM1P22-201ENST00000427761 952 ntBASIC4.99□□□□□ -1.61
PKNOX1P55347 AL389925.1-201ENST00000432257 728 ntBASIC4.99□□□□□ -1.61
PKNOX1P55347 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.99□□□□□ -1.61
PKNOX1P55347 RPL7AP61-201ENST00000443410 636 ntBASIC4.99□□□□□ -1.61
PKNOX1P55347 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.99□□□□□ -1.61
PKNOX1P55347 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PKNOX1P55347 Z92846.1-201ENST00000456203 268 ntBASIC4.99□□□□□ -1.61
PKNOX1P55347 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.99□□□□□ -1.61
PKNOX1P55347 AC020779.1-201ENST00000478757 796 ntBASIC4.99□□□□□ -1.61
PKNOX1P55347 RN7SL547P-201ENST00000490793 290 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms