Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDH6P55285 AP000534.2-201ENST00000412729 568 ntBASIC5.32□□□□□ -1.56
CDH6P55285 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.32□□□□□ -1.56
CDH6P55285 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH6P55285 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH6P55285 AC005412.2-201ENST00000492004 341 ntBASIC5.32□□□□□ -1.56
CDH6P55285 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH6P55285 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
CDH6P55285 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH6P55285 AC004825.1-201ENST00000555068 586 ntBASIC5.32□□□□□ -1.56
CDH6P55285 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.32□□□□□ -1.56
CDH6P55285 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH6P55285 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH6P55285 AP005432.2-201ENST00000608162 586 ntBASIC5.32□□□□□ -1.56
CDH6P55285 AC008833.1-201ENST00000611633 691 ntBASIC5.32□□□□□ -1.56
CDH6P55285 RPSAP73-201ENST00000614820 330 ntBASIC5.32□□□□□ -1.56
CDH6P55285 MIR6729-201ENST00000618194 65 ntBASIC5.32□□□□□ -1.56
CDH6P55285 AP002505.2-201ENST00000623585 696 ntBASIC5.32□□□□□ -1.56
CDH6P55285 AC004808.2-201ENST00000627965 773 ntBASIC5.32□□□□□ -1.56
CDH6P55285 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CDH6P55285 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH6P55285 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH6P55285 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CDH6P55285 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH6P55285 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDH6P55285 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH6P55285 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDH6P55285 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDH6P55285 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH6P55285 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDH6P55285 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CDH6P55285 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH6P55285 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH6P55285 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CDH6P55285 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.31□□□□□ -1.56
CDH6P55285 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDH6P55285 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH6P55285 MAPK10-338ENST00000641647 3362 ntBASIC5.31□□□□□ -1.56
CDH6P55285 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.31□□□□□ -1.56
CDH6P55285 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
CDH6P55285 SNORA17.1-201ENST00000362945 126 ntBASIC5.31□□□□□ -1.56
CDH6P55285 SNORA51.1-201ENST00000363243 140 ntBASIC5.31□□□□□ -1.56
CDH6P55285 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH6P55285 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH6P55285 SNORA2.3-201ENST00000383920 135 ntBASIC5.31□□□□□ -1.56
CDH6P55285 DUTP5-201ENST00000406790 469 ntBASIC5.31□□□□□ -1.56
CDH6P55285 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH6P55285 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.31□□□□□ -1.56
CDH6P55285 COX6CP13-201ENST00000428703 226 ntBASIC5.31□□□□□ -1.56
CDH6P55285 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH6P55285 TCEA1P3-201ENST00000443005 880 ntBASIC5.31□□□□□ -1.56
CDH6P55285 RN7SL443P-201ENST00000464331 290 ntBASIC5.31□□□□□ -1.56
CDH6P55285 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH6P55285 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH6P55285 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH6P55285 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.31□□□□□ -1.56
CDH6P55285 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH6P55285 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDH6P55285 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH6P55285 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH6P55285 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.31□□□□□ -1.56
CDH6P55285 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH6P55285 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.31□□□□□ -1.56
CDH6P55285 AC126915.2-201ENST00000610957 190 ntBASIC5.31□□□□□ -1.56
CDH6P55285 MIR6886-201ENST00000619864 61 ntBASIC5.31□□□□□ -1.56
CDH6P55285 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.31□□□□□ -1.56
CDH6P55285 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.31□□□□□ -1.56
CDH6P55285 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDH6P55285 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDH6P55285 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDH6P55285 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
CDH6P55285 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDH6P55285 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.31□□□□□ -1.56
CDH6P55285 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH6P55285 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CDH6P55285 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH6P55285 CDC27P2-201ENST00000425026 1922 ntBASIC5.31□□□□□ -1.56
CDH6P55285 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH6P55285 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH6P55285 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH6P55285 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH6P55285 PABPC1P6-201ENST00000445594 1829 ntBASIC5.3□□□□□ -1.56
CDH6P55285 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH6P55285 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CDH6P55285 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH6P55285 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH6P55285 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CDH6P55285 PANDAR-201ENST00000629595 1506 ntBASIC5.3□□□□□ -1.56
CDH6P55285 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH6P55285 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH6P55285 RN7SKP113-201ENST00000363891 295 ntBASIC5.3□□□□□ -1.56
CDH6P55285 SMC4P1-201ENST00000414479 527 ntBASIC5.3□□□□□ -1.56
CDH6P55285 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CDH6P55285 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH6P55285 AL139148.1-201ENST00000427122 680 ntBASIC5.3□□□□□ -1.56
CDH6P55285 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH6P55285 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH6P55285 AC245047.2-201ENST00000441060 530 ntBASIC5.3□□□□□ -1.56
CDH6P55285 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH6P55285 RN7SL172P-201ENST00000460535 303 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms