Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.12□□□□□ -1.59
CXCL12P48061 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.12□□□□□ -1.59
CXCL12P48061 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL12P48061 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.12□□□□□ -1.59
CXCL12P48061 RN7SL443P-201ENST00000464331 290 ntBASIC5.12□□□□□ -1.59
CXCL12P48061 AC010350.1-201ENST00000504908 231 ntBASIC5.12□□□□□ -1.59
CXCL12P48061 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.12□□□□□ -1.59
CXCL12P48061 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.12□□□□□ -1.59
CXCL12P48061 AC009643.1-201ENST00000532030 391 ntBASIC5.12□□□□□ -1.59
CXCL12P48061 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.12□□□□□ -1.59
CXCL12P48061 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL12P48061 AC006338.2-201ENST00000616864 791 ntBASIC5.12□□□□□ -1.59
CXCL12P48061 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL12P48061 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.12□□□□□ -1.59
CXCL12P48061 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.12□□□□□ -1.59
CXCL12P48061 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL12P48061 Z98755.1-201ENST00000407015 1384 ntBASIC5.12□□□□□ -1.59
CXCL12P48061 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL12P48061 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.12□□□□□ -1.59
CXCL12P48061 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CXCL12P48061 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.12□□□□□ -1.59
CXCL12P48061 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.12□□□□□ -1.59
CXCL12P48061 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.12□□□□□ -1.59
CXCL12P48061 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CXCL12P48061 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CXCL12P48061 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL12P48061 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CXCL12P48061 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL12P48061 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL12P48061 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.11□□□□□ -1.59
CXCL12P48061 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CXCL12P48061 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL12P48061 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.11□□□□□ -1.59
CXCL12P48061 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL12P48061 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CXCL12P48061 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL12P48061 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL12P48061 AC034229.2-201ENST00000566945 2508 ntBASIC5.11□□□□□ -1.59
CXCL12P48061 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
CXCL12P48061 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CXCL12P48061 RN7SKP100-201ENST00000411258 284 ntBASIC5.11□□□□□ -1.59
CXCL12P48061 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.11□□□□□ -1.59
CXCL12P48061 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.11□□□□□ -1.59
CXCL12P48061 OR5M12P-201ENST00000423388 929 ntBASIC5.11□□□□□ -1.59
CXCL12P48061 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.11□□□□□ -1.59
CXCL12P48061 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.11□□□□□ -1.59
CXCL12P48061 AC010326.1-201ENST00000462726 602 ntBASIC5.11□□□□□ -1.59
CXCL12P48061 MRPS33P2-201ENST00000507850 322 ntBASIC5.11□□□□□ -1.59
CXCL12P48061 GLUD1P3-202ENST00000508551 200 ntBASIC5.11□□□□□ -1.59
CXCL12P48061 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.11□□□□□ -1.59
CXCL12P48061 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL12P48061 AL020997.2-201ENST00000602607 184 ntBASIC5.11□□□□□ -1.59
CXCL12P48061 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.11□□□□□ -1.59
CXCL12P48061 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.11□□□□□ -1.59
CXCL12P48061 AL117378.2-201ENST00000622916 1337 ntBASIC5.11□□□□□ -1.59
CXCL12P48061 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CXCL12P48061 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.11□□□□□ -1.59
CXCL12P48061 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL12P48061 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL12P48061 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CXCL12P48061 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL12P48061 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.11□□□□□ -1.59
CXCL12P48061 AC099654.2-201ENST00000433031 1980 ntBASIC5.11□□□□□ -1.59
CXCL12P48061 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
CXCL12P48061 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.11□□□□□ -1.59
CXCL12P48061 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.11□□□□□ -1.59
CXCL12P48061 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.11□□□□□ -1.59
CXCL12P48061 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.11□□□□□ -1.59
CXCL12P48061 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL12P48061 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL12P48061 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.1□□□□□ -1.59
CXCL12P48061 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL12P48061 A2MP1-204ENST00000566278 4130 ntBASIC5.1□□□□□ -1.59
CXCL12P48061 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CXCL12P48061 AC005261.2-201ENST00000593427 4258 ntBASIC5.1□□□□□ -1.59
CXCL12P48061 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL12P48061 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL12P48061 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL12P48061 AF186996.5-201ENST00000418098 904 ntBASIC5.1□□□□□ -1.59
CXCL12P48061 AC004074.1-201ENST00000421810 1063 ntBASIC5.1□□□□□ -1.59
CXCL12P48061 SETP9-201ENST00000423837 832 ntBASIC5.1□□□□□ -1.59
CXCL12P48061 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.1□□□□□ -1.59
CXCL12P48061 AC124944.2-201ENST00000429866 1242 ntBASIC5.1□□□□□ -1.59
CXCL12P48061 RPL36AP15-201ENST00000444514 266 ntBASIC5.1□□□□□ -1.59
CXCL12P48061 AL356981.1-201ENST00000454879 684 ntBASIC5.1□□□□□ -1.59
CXCL12P48061 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL12P48061 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.1□□□□□ -1.59
CXCL12P48061 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL12P48061 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.1□□□□□ -1.59
CXCL12P48061 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.1□□□□□ -1.59
CXCL12P48061 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL12P48061 AC111000.3-201ENST00000508057 576 ntBASIC5.1□□□□□ -1.59
CXCL12P48061 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL12P48061 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.1□□□□□ -1.59
CXCL12P48061 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.1□□□□□ -1.59
CXCL12P48061 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.1□□□□□ -1.59
CXCL12P48061 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.1□□□□□ -1.59
CXCL12P48061 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.1□□□□□ -1.59
CXCL12P48061 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.1□□□□□ -1.59
CXCL12P48061 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms