Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.66□□□□□ -1.5
CD40P25942 AC010487.1-201ENST00000594408 1172 ntBASIC5.66□□□□□ -1.5
CD40P25942 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.66□□□□□ -1.5
CD40P25942 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.66□□□□□ -1.5
CD40P25942 AC073544.2-201ENST00000601155 540 ntBASIC5.66□□□□□ -1.5
CD40P25942 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.66□□□□□ -1.5
CD40P25942 AL139286.2-201ENST00000606838 396 ntBASIC5.66□□□□□ -1.5
CD40P25942 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.66□□□□□ -1.5
CD40P25942 AC245297.2-201ENST00000610119 565 ntBASIC5.66□□□□□ -1.5
CD40P25942 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD40P25942 AC092656.1-203ENST00000624134 423 ntBASIC5.66□□□□□ -1.5
CD40P25942 AL132796.3-201ENST00000624703 900 ntBASIC5.66□□□□□ -1.5
CD40P25942 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.66□□□□□ -1.5
CD40P25942 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD40P25942 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC5.66□□□□□ -1.5
CD40P25942 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD40P25942 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD40P25942 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CD40P25942 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.66□□□□□ -1.5
CD40P25942 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
CD40P25942 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.66□□□□□ -1.5
CD40P25942 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD40P25942 MTND4P4-201ENST00000439033 1366 ntBASIC5.66□□□□□ -1.5
CD40P25942 AL139384.2-201ENST00000613809 3590 ntBASIC5.66□□□□□ -1.5
CD40P25942 AL359195.2-201ENST00000623657 4412 ntBASIC5.66□□□□□ -1.5
CD40P25942 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD40P25942 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD40P25942 AC022819.1-201ENST00000563495 3910 ntBASIC5.66□□□□□ -1.5
CD40P25942 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD40P25942 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CD40P25942 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CD40P25942 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
CD40P25942 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CD40P25942 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CD40P25942 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CD40P25942 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.65□□□□□ -1.5
CD40P25942 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CD40P25942 AC074141.1-201ENST00000588129 2995 ntBASIC5.65□□□□□ -1.5
CD40P25942 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CD40P25942 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CD40P25942 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.65□□□□□ -1.5
CD40P25942 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.65□□□□□ -1.5
CD40P25942 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CD40P25942 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CD40P25942 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CD40P25942 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CD40P25942 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CD40P25942 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CD40P25942 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.65□□□□□ -1.5
CD40P25942 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CD40P25942 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
CD40P25942 RN7SKP187-201ENST00000365536 330 ntBASIC5.65□□□□□ -1.5
CD40P25942 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
CD40P25942 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
CD40P25942 FABP12P1-201ENST00000401911 322 ntBASIC5.65□□□□□ -1.5
CD40P25942 AL121978.1-201ENST00000402778 359 ntBASIC5.65□□□□□ -1.5
CD40P25942 RN7SKP86-201ENST00000410454 332 ntBASIC5.65□□□□□ -1.5
CD40P25942 RN7SKP273-201ENST00000411392 314 ntBASIC5.65□□□□□ -1.5
CD40P25942 MTCO1P21-201ENST00000416634 589 ntBASIC5.65□□□□□ -1.5
CD40P25942 AC048351.1-201ENST00000420064 602 ntBASIC5.65□□□□□ -1.5
CD40P25942 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CD40P25942 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CD40P25942 AC083862.1-201ENST00000427378 1242 ntBASIC5.65□□□□□ -1.5
CD40P25942 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.65□□□□□ -1.5
CD40P25942 MTCYBP39-201ENST00000437562 491 ntBASIC5.65□□□□□ -1.5
CD40P25942 AP000936.3-201ENST00000438127 255 ntBASIC5.65□□□□□ -1.5
CD40P25942 AL137845.2-201ENST00000444292 988 ntBASIC5.65□□□□□ -1.5
CD40P25942 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.65□□□□□ -1.5
CD40P25942 AL591363.1-201ENST00000450091 483 ntBASIC5.65□□□□□ -1.5
CD40P25942 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.65□□□□□ -1.5
CD40P25942 MTND1P27-201ENST00000451117 902 ntBASIC5.65□□□□□ -1.5
CD40P25942 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.65□□□□□ -1.5
CD40P25942 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.65□□□□□ -1.5
CD40P25942 MARK2P8-201ENST00000476069 952 ntBASIC5.65□□□□□ -1.5
CD40P25942 OR9A1P-202ENST00000484361 945 ntBASIC5.65□□□□□ -1.5
CD40P25942 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.65□□□□□ -1.5
CD40P25942 RPL5P14-201ENST00000494197 878 ntBASIC5.65□□□□□ -1.5
CD40P25942 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.65□□□□□ -1.5
CD40P25942 AC091965.2-201ENST00000512324 613 ntBASIC5.65□□□□□ -1.5
CD40P25942 CR383658.1-201ENST00000514609 734 ntBASIC5.65□□□□□ -1.5
CD40P25942 MTCO2P32-201ENST00000514865 403 ntBASIC5.65□□□□□ -1.5
CD40P25942 RNU6-885P-201ENST00000516607 104 ntBASIC5.65□□□□□ -1.5
CD40P25942 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CD40P25942 COX6B1P6-201ENST00000522347 255 ntBASIC5.65□□□□□ -1.5
CD40P25942 SMARCE1P4-201ENST00000523647 241 ntBASIC5.65□□□□□ -1.5
CD40P25942 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.65□□□□□ -1.5
CD40P25942 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.65□□□□□ -1.5
CD40P25942 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.65□□□□□ -1.5
CD40P25942 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC5.65□□□□□ -1.5
CD40P25942 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.65□□□□□ -1.5
CD40P25942 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
CD40P25942 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.65□□□□□ -1.5
CD40P25942 AC023968.1-201ENST00000560719 475 ntBASIC5.65□□□□□ -1.5
CD40P25942 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CD40P25942 AP005262.1-201ENST00000582646 997 ntBASIC5.65□□□□□ -1.5
CD40P25942 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.65□□□□□ -1.5
CD40P25942 BUB1P1-201ENST00000603541 607 ntBASIC5.65□□□□□ -1.5
CD40P25942 AC080078.2-201ENST00000603766 501 ntBASIC5.65□□□□□ -1.5
CD40P25942 AC112220.3-201ENST00000605502 502 ntBASIC5.65□□□□□ -1.5
CD40P25942 AC006270.3-201ENST00000605967 1036 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms