Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC7.28□□□□□ -1.24
LIG1P18858 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC7.28□□□□□ -1.24
LIG1P18858 AC017083.3-201ENST00000609955 700 ntBASIC7.28□□□□□ -1.24
LIG1P18858 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
LIG1P18858 AC015660.5-201ENST00000623238 564 ntBASIC7.28□□□□□ -1.24
LIG1P18858 AF246928.1-201ENST00000623768 87 ntBASIC7.28□□□□□ -1.24
LIG1P18858 AL162377.2-201ENST00000624532 337 ntBASIC7.28□□□□□ -1.24
LIG1P18858 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC7.28□□□□□ -1.24
LIG1P18858 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LIG1P18858 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LIG1P18858 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC7.28□□□□□ -1.24
LIG1P18858 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.28□□□□□ -1.24
LIG1P18858 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LIG1P18858 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC7.28□□□□□ -1.24
LIG1P18858 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LIG1P18858 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
LIG1P18858 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.28□□□□□ -1.24
LIG1P18858 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC7.28□□□□□ -1.24
LIG1P18858 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
LIG1P18858 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LIG1P18858 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.28□□□□□ -1.24
LIG1P18858 GUCY1B2-204ENST00000531898 1979 ntBASIC7.28□□□□□ -1.24
LIG1P18858 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.28□□□□□ -1.24
LIG1P18858 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LIG1P18858 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.25
LIG1P18858 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LIG1P18858 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.25
LIG1P18858 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LIG1P18858 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.27□□□□□ -1.25
LIG1P18858 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
LIG1P18858 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC7.27□□□□□ -1.25
LIG1P18858 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
LIG1P18858 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
LIG1P18858 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LIG1P18858 RNU6-1251P-201ENST00000364502 107 ntBASIC7.27□□□□□ -1.25
LIG1P18858 RNA5SP478-201ENST00000364657 115 ntBASIC7.27□□□□□ -1.25
LIG1P18858 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
LIG1P18858 Y_RNA.517-201ENST00000384551 106 ntBASIC7.27□□□□□ -1.25
LIG1P18858 Y_RNA.553-201ENST00000384670 102 ntBASIC7.27□□□□□ -1.25
LIG1P18858 AL590084.2-201ENST00000401481 382 ntBASIC7.27□□□□□ -1.25
LIG1P18858 GLS-204ENST00000409428 816 ntTSL 2 BASIC7.27□□□□□ -1.25
LIG1P18858 AC105402.1-201ENST00000413336 545 ntBASIC7.27□□□□□ -1.25
LIG1P18858 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.27□□□□□ -1.25
LIG1P18858 AC098592.1-201ENST00000419352 333 ntBASIC7.27□□□□□ -1.25
LIG1P18858 AC007562.1-201ENST00000421819 517 ntBASIC7.27□□□□□ -1.25
LIG1P18858 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC7.27□□□□□ -1.25
LIG1P18858 RPL7AP14-201ENST00000424041 802 ntBASIC7.27□□□□□ -1.25
LIG1P18858 RPS4XP16-201ENST00000427198 791 ntBASIC7.27□□□□□ -1.25
LIG1P18858 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
LIG1P18858 AC013403.1-201ENST00000436954 263 ntBASIC7.27□□□□□ -1.25
LIG1P18858 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.27□□□□□ -1.25
LIG1P18858 AC023274.2-201ENST00000445264 521 ntBASIC7.27□□□□□ -1.25
LIG1P18858 UBBP5-201ENST00000446970 266 ntBASIC7.27□□□□□ -1.25
LIG1P18858 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC7.27□□□□□ -1.25
LIG1P18858 AURKAPS1-201ENST00000451805 1212 ntBASIC7.27□□□□□ -1.25
LIG1P18858 AL109741.2-201ENST00000455561 343 ntBASIC7.27□□□□□ -1.25
LIG1P18858 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC7.27□□□□□ -1.25
LIG1P18858 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC7.27□□□□□ -1.25
LIG1P18858 RPL30P6-201ENST00000475925 342 ntBASIC7.27□□□□□ -1.25
LIG1P18858 AC090058.1-201ENST00000498788 435 ntBASIC7.27□□□□□ -1.25
LIG1P18858 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LIG1P18858 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.27□□□□□ -1.25
LIG1P18858 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.27□□□□□ -1.25
LIG1P18858 IGKV1D-22-201ENST00000518953 324 ntBASIC7.27□□□□□ -1.25
LIG1P18858 AC116917.1-201ENST00000520558 305 ntBASIC7.27□□□□□ -1.25
LIG1P18858 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC7.27□□□□□ -1.25
LIG1P18858 DUXAP1-201ENST00000556632 463 ntBASIC7.27□□□□□ -1.25
LIG1P18858 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.27□□□□□ -1.25
LIG1P18858 AC007494.1-201ENST00000562293 760 ntBASIC7.27□□□□□ -1.25
LIG1P18858 AC092718.4-201ENST00000566639 716 ntBASIC7.27□□□□□ -1.25
LIG1P18858 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.27□□□□□ -1.25
LIG1P18858 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.27□□□□□ -1.25
LIG1P18858 AC090616.1-201ENST00000583895 447 ntBASIC7.27□□□□□ -1.25
LIG1P18858 MIR4420-201ENST00000583944 77 ntBASIC7.27□□□□□ -1.25
LIG1P18858 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC7.27□□□□□ -1.25
LIG1P18858 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.27□□□□□ -1.25
LIG1P18858 AL031281.1-201ENST00000604049 488 ntBASIC7.27□□□□□ -1.25
LIG1P18858 AC012368.3-201ENST00000604190 219 ntBASIC7.27□□□□□ -1.25
LIG1P18858 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.27□□□□□ -1.25
LIG1P18858 AC011451.2-201ENST00000604303 598 ntBASIC7.27□□□□□ -1.25
LIG1P18858 AC019257.2-201ENST00000605539 497 ntBASIC7.27□□□□□ -1.25
LIG1P18858 AL133370.2-201ENST00000619934 439 ntBASIC7.27□□□□□ -1.25
LIG1P18858 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
LIG1P18858 NXF4-202ENST00000416098 1465 ntBASIC7.27□□□□□ -1.25
LIG1P18858 AC217777.1-201ENST00000570034 1471 ntBASIC7.27□□□□□ -1.25
LIG1P18858 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC7.27□□□□□ -1.25
LIG1P18858 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LIG1P18858 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
LIG1P18858 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
LIG1P18858 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LIG1P18858 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LIG1P18858 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.26□□□□□ -1.25
LIG1P18858 NCLP2-201ENST00000416078 1462 ntBASIC7.26□□□□□ -1.25
LIG1P18858 Z83820.1-201ENST00000456978 1499 ntBASIC7.26□□□□□ -1.25
LIG1P18858 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
LIG1P18858 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
LIG1P18858 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
LIG1P18858 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LIG1P18858 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LIG1P18858 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms