Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CFTRP13569 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
CFTRP13569 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.42□□□□□ -1.06
CFTRP13569 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC8.42□□□□□ -1.06
CFTRP13569 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
CFTRP13569 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CFTRP13569 OR6C69P-201ENST00000394268 893 ntBASIC8.42□□□□□ -1.06
CFTRP13569 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CFTRP13569 RPL7AP49-201ENST00000429522 581 ntBASIC8.42□□□□□ -1.06
CFTRP13569 RPS27AP12-201ENST00000429552 465 ntBASIC8.42□□□□□ -1.06
CFTRP13569 AL591438.1-201ENST00000433508 581 ntBASIC8.42□□□□□ -1.06
CFTRP13569 BX679664.2-201ENST00000439282 283 ntBASIC8.42□□□□□ -1.06
CFTRP13569 SCAND3P1-201ENST00000439854 1060 ntBASIC8.42□□□□□ -1.06
CFTRP13569 CBX1P1-201ENST00000440184 427 ntBASIC8.42□□□□□ -1.06
CFTRP13569 RPL7P32-201ENST00000457119 744 ntBASIC8.42□□□□□ -1.06
CFTRP13569 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC8.42□□□□□ -1.06
CFTRP13569 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CFTRP13569 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CFTRP13569 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
CFTRP13569 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CFTRP13569 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC8.42□□□□□ -1.06
CFTRP13569 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC8.42□□□□□ -1.06
CFTRP13569 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC8.42□□□□□ -1.06
CFTRP13569 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
CFTRP13569 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CFTRP13569 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC8.41□□□□□ -1.06
CFTRP13569 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
CFTRP13569 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CFTRP13569 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
CFTRP13569 AL442639.1-201ENST00000625030 1899 ntBASIC8.41□□□□□ -1.06
CFTRP13569 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC8.41□□□□□ -1.06
CFTRP13569 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CFTRP13569 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CFTRP13569 GLUD1P9-201ENST00000420997 1173 ntBASIC8.41□□□□□ -1.06
CFTRP13569 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC8.41□□□□□ -1.06
CFTRP13569 RN7SL604P-201ENST00000492589 296 ntBASIC8.41□□□□□ -1.06
CFTRP13569 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC8.41□□□□□ -1.06
CFTRP13569 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CFTRP13569 BNIP3P22-201ENST00000593399 556 ntBASIC8.41□□□□□ -1.06
CFTRP13569 AL161637.1-201ENST00000622380 412 ntBASIC8.41□□□□□ -1.06
CFTRP13569 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC8.41□□□□□ -1.06
CFTRP13569 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
CFTRP13569 RBPJP2-201ENST00000618187 1444 ntBASIC8.41□□□□□ -1.06
CFTRP13569 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CFTRP13569 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC8.41□□□□□ -1.06
CFTRP13569 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CFTRP13569 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CFTRP13569 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC8.4□□□□□ -1.06
CFTRP13569 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
CFTRP13569 RPL7P57-201ENST00000423238 740 ntBASIC8.4□□□□□ -1.06
CFTRP13569 AC097523.2-201ENST00000435551 652 ntBASIC8.4□□□□□ -1.06
CFTRP13569 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC8.4□□□□□ -1.06
CFTRP13569 MTND2P28-201ENST00000457540 1044 ntBASIC8.4□□□□□ -1.06
CFTRP13569 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CFTRP13569 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC8.4□□□□□ -1.06
CFTRP13569 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC8.4□□□□□ -1.06
CFTRP13569 AC007224.1-201ENST00000564410 144 ntBASIC8.4□□□□□ -1.06
CFTRP13569 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC8.4□□□□□ -1.06
CFTRP13569 AP001357.1-201ENST00000586304 1053 ntBASIC8.4□□□□□ -1.06
CFTRP13569 AC024941.1-201ENST00000612250 334 ntBASIC8.4□□□□□ -1.06
CFTRP13569 AC019206.1-201ENST00000621938 425 ntBASIC8.4□□□□□ -1.06
CFTRP13569 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CFTRP13569 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC8.4□□□□□ -1.06
CFTRP13569 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CFTRP13569 DMD-202ENST00000343523 5623 ntTSL 5 BASIC8.4□□□□□ -1.06
CFTRP13569 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC8.4□□□□□ -1.07
CFTRP13569 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
CFTRP13569 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
CFTRP13569 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
CFTRP13569 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.07
CFTRP13569 AC044797.1-201ENST00000445744 679 ntBASIC8.39□□□□□ -1.07
CFTRP13569 EEF1A1P1-201ENST00000447052 739 ntBASIC8.39□□□□□ -1.07
CFTRP13569 NPM1P6-201ENST00000521088 871 ntBASIC8.39□□□□□ -1.07
CFTRP13569 AP001781.1-201ENST00000530977 207 ntBASIC8.39□□□□□ -1.07
CFTRP13569 MIR3138-201ENST00000585238 82 ntBASIC8.39□□□□□ -1.07
CFTRP13569 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC8.39□□□□□ -1.07
CFTRP13569 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC8.39□□□□□ -1.07
CFTRP13569 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CFTRP13569 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CFTRP13569 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CFTRP13569 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC8.39□□□□□ -1.07
CFTRP13569 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
CFTRP13569 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CFTRP13569 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CFTRP13569 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CFTRP13569 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CFTRP13569 OR4K17-201ENST00000315543 1032 ntBASIC8.38□□□□□ -1.07
CFTRP13569 RPL32P23-201ENST00000397237 405 ntBASIC8.38□□□□□ -1.07
CFTRP13569 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC8.38□□□□□ -1.07
CFTRP13569 U3.32-201ENST00000408116 212 ntBASIC8.38□□□□□ -1.07
CFTRP13569 AL591848.1-201ENST00000413092 322 ntBASIC8.38□□□□□ -1.07
CFTRP13569 RPL21P108-201ENST00000413857 481 ntBASIC8.38□□□□□ -1.07
CFTRP13569 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CFTRP13569 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC8.38□□□□□ -1.07
CFTRP13569 RPL34P27-201ENST00000428810 349 ntBASIC8.38□□□□□ -1.07
CFTRP13569 AC046176.1-201ENST00000435260 1170 ntBASIC8.38□□□□□ -1.07
CFTRP13569 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CFTRP13569 FHP1-201ENST00000442741 703 ntBASIC8.38□□□□□ -1.07
CFTRP13569 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC8.38□□□□□ -1.07
CFTRP13569 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms