Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 OR5AW1P-201ENST00000426334 1006 ntBASIC6.2□□□□□ -1.42
COL6A2P12110 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.2□□□□□ -1.42
COL6A2P12110 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.2□□□□□ -1.42
COL6A2P12110 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.2□□□□□ -1.42
COL6A2P12110 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.2□□□□□ -1.42
COL6A2P12110 RANP2-201ENST00000456833 229 ntBASIC6.2□□□□□ -1.42
COL6A2P12110 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
COL6A2P12110 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.2□□□□□ -1.42
COL6A2P12110 RN7SL350P-201ENST00000492591 299 ntBASIC6.2□□□□□ -1.42
COL6A2P12110 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC6.2□□□□□ -1.42
COL6A2P12110 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC6.2□□□□□ -1.42
COL6A2P12110 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC6.2□□□□□ -1.42
COL6A2P12110 CDH12P2-201ENST00000504393 298 ntBASIC6.2□□□□□ -1.42
COL6A2P12110 AC008945.1-201ENST00000505144 499 ntBASIC6.2□□□□□ -1.42
COL6A2P12110 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC6.2□□□□□ -1.42
COL6A2P12110 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC6.2□□□□□ -1.42
COL6A2P12110 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC6.2□□□□□ -1.42
COL6A2P12110 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC6.2□□□□□ -1.42
COL6A2P12110 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL6A2P12110 MTND1P5-201ENST00000517906 940 ntBASIC6.2□□□□□ -1.42
COL6A2P12110 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.2□□□□□ -1.42
COL6A2P12110 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC6.2□□□□□ -1.42
COL6A2P12110 AC020937.1-201ENST00000519677 1013 ntBASIC6.2□□□□□ -1.42
COL6A2P12110 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC6.2□□□□□ -1.42
COL6A2P12110 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC6.2□□□□□ -1.42
COL6A2P12110 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.2□□□□□ -1.42
COL6A2P12110 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC6.2□□□□□ -1.42
COL6A2P12110 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.2□□□□□ -1.42
COL6A2P12110 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC6.2□□□□□ -1.42
COL6A2P12110 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.2□□□□□ -1.42
COL6A2P12110 DYNLL1P1-201ENST00000595442 269 ntBASIC6.2□□□□□ -1.42
COL6A2P12110 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.2□□□□□ -1.42
COL6A2P12110 RDM1-219ENST00000615378 542 ntTSL 3 BASIC6.2□□□□□ -1.42
COL6A2P12110 AL035661.1-201ENST00000620459 1144 ntBASIC6.2□□□□□ -1.42
COL6A2P12110 MFSD8-245ENST00000641743 948 ntBASIC6.2□□□□□ -1.42
COL6A2P12110 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL6A2P12110 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL6A2P12110 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.2□□□□□ -1.42
COL6A2P12110 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
COL6A2P12110 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL6A2P12110 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.2□□□□□ -1.42
COL6A2P12110 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL6A2P12110 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.2□□□□□ -1.42
COL6A2P12110 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL6A2P12110 TTC39DP-201ENST00000416781 1688 ntBASIC6.2□□□□□ -1.42
COL6A2P12110 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
COL6A2P12110 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.19□□□□□ -1.42
COL6A2P12110 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
COL6A2P12110 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.19□□□□□ -1.42
COL6A2P12110 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL6A2P12110 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL6A2P12110 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL6A2P12110 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
COL6A2P12110 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.19□□□□□ -1.42
COL6A2P12110 CAP1P2-201ENST00000417455 1409 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL6A2P12110 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
COL6A2P12110 FAM3C2-201ENST00000312214 681 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 OR56A4-201ENST00000330728 1209 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.19□□□□□ -1.42
COL6A2P12110 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
COL6A2P12110 RNA5SP308-201ENST00000362532 115 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 Y_RNA.192-201ENST00000363977 102 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 RN7SKP221-201ENST00000410420 301 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 VTA1P1-201ENST00000414044 866 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 MTCO3P41-201ENST00000414801 328 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 AL590806.1-201ENST00000415818 853 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 AL354707.3-201ENST00000427308 331 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.19□□□□□ -1.42
COL6A2P12110 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.19□□□□□ -1.42
COL6A2P12110 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.19□□□□□ -1.42
COL6A2P12110 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6.19□□□□□ -1.42
COL6A2P12110 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC6.19□□□□□ -1.42
COL6A2P12110 AL354941.1-201ENST00000438600 464 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 MTCYBP34-201ENST00000439552 670 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 NPM1P23-201ENST00000440193 849 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 AC016908.1-201ENST00000442571 1219 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC6.19□□□□□ -1.42
COL6A2P12110 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.19□□□□□ -1.42
COL6A2P12110 AC093166.3-201ENST00000448785 303 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 AC009244.1-201ENST00000450566 258 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 VN1R32P-201ENST00000452234 905 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.19□□□□□ -1.42
COL6A2P12110 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL6A2P12110 RPL30P6-201ENST00000475925 342 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC6.19□□□□□ -1.42
COL6A2P12110 AC117394.1-201ENST00000477323 567 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 AC011352.1-201ENST00000512300 793 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC6.19□□□□□ -1.42
COL6A2P12110 MTATP6P1-201ENST00000514057 681 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.19□□□□□ -1.42
COL6A2P12110 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC6.19□□□□□ -1.42
COL6A2P12110 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL6A2P12110 AP000619.3-201ENST00000535634 1127 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.19□□□□□ -1.42
COL6A2P12110 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.19□□□□□ -1.42
COL6A2P12110 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.19□□□□□ -1.42
COL6A2P12110 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.19□□□□□ -1.42
COL6A2P12110 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.19□□□□□ -1.42
COL6A2P12110 MTCO1P40-201ENST00000574371 625 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms