Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
TOP2AP11388 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC8.6□□□□□ -1.03
TOP2AP11388 RNA5SP241-201ENST00000391326 114 ntBASIC8.59□□□□□ -1.03
TOP2AP11388 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC8.59□□□□□ -1.03
TOP2AP11388 AC023141.6-201ENST00000429418 337 ntBASIC8.59□□□□□ -1.03
TOP2AP11388 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC8.59□□□□□ -1.03
TOP2AP11388 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC8.59□□□□□ -1.03
TOP2AP11388 AC022726.1-201ENST00000587475 207 ntBASIC8.59□□□□□ -1.03
TOP2AP11388 AC005962.2-201ENST00000611427 652 ntBASIC8.59□□□□□ -1.03
TOP2AP11388 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC8.59□□□□□ -1.03
TOP2AP11388 IPO5-229ENST00000631030 192 ntTSL 5 BASIC8.59□□□□□ -1.03
TOP2AP11388 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC8.59□□□□□ -1.03
TOP2AP11388 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TOP2AP11388 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
TOP2AP11388 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TOP2AP11388 OFD1P8Y-201ENST00000449148 1433 ntBASIC8.59□□□□□ -1.03
TOP2AP11388 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TOP2AP11388 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TOP2AP11388 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TOP2AP11388 AL732292.1-201ENST00000426692 226 ntBASIC8.59□□□□□ -1.03
TOP2AP11388 AC097523.2-201ENST00000435551 652 ntBASIC8.59□□□□□ -1.03
TOP2AP11388 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC8.59□□□□□ -1.03
TOP2AP11388 RN7SL197P-201ENST00000466981 299 ntBASIC8.59□□□□□ -1.03
TOP2AP11388 AC092709.1-201ENST00000521355 1045 ntBASIC8.59□□□□□ -1.03
TOP2AP11388 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC8.59□□□□□ -1.03
TOP2AP11388 AP000919.1-201ENST00000582850 985 ntBASIC8.59□□□□□ -1.03
TOP2AP11388 MLECP1-201ENST00000615893 709 ntBASIC8.59□□□□□ -1.03
TOP2AP11388 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
TOP2AP11388 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
TOP2AP11388 AL021877.2-201ENST00000624442 10684 ntBASIC8.58□□□□□ -1.04
TOP2AP11388 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
TOP2AP11388 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC8.58□□□□□ -1.04
TOP2AP11388 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TOP2AP11388 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TOP2AP11388 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TOP2AP11388 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TOP2AP11388 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
TOP2AP11388 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
TOP2AP11388 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TOP2AP11388 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC8.58□□□□□ -1.04
TOP2AP11388 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TOP2AP11388 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TOP2AP11388 COX6CP13-201ENST00000428703 226 ntBASIC8.58□□□□□ -1.04
TOP2AP11388 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC8.58□□□□□ -1.04
TOP2AP11388 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC8.58□□□□□ -1.04
TOP2AP11388 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC8.58□□□□□ -1.04
TOP2AP11388 TOMM20P2-201ENST00000540082 421 ntBASIC8.58□□□□□ -1.04
TOP2AP11388 NDUFB4P11-201ENST00000560510 395 ntBASIC8.58□□□□□ -1.04
TOP2AP11388 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC8.58□□□□□ -1.04
TOP2AP11388 AL356218.2-201ENST00000605264 187 ntBASIC8.58□□□□□ -1.04
TOP2AP11388 AC068724.3-201ENST00000625906 87 ntBASIC8.58□□□□□ -1.04
TOP2AP11388 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC8.58□□□□□ -1.04
TOP2AP11388 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC8.57□□□□□ -1.04
TOP2AP11388 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC8.57□□□□□ -1.04
TOP2AP11388 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TOP2AP11388 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
TOP2AP11388 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC8.57□□□□□ -1.04
TOP2AP11388 ZFRP1-201ENST00000457579 2970 ntBASIC8.57□□□□□ -1.04
TOP2AP11388 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
TOP2AP11388 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
TOP2AP11388 AC073143.1-201ENST00000436316 395 ntBASIC8.57□□□□□ -1.04
TOP2AP11388 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC8.57□□□□□ -1.04
TOP2AP11388 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC8.57□□□□□ -1.04
TOP2AP11388 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TOP2AP11388 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC8.57□□□□□ -1.04
TOP2AP11388 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TOP2AP11388 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC8.57□□□□□ -1.04
TOP2AP11388 KPNA2P3-201ENST00000584190 848 ntBASIC8.57□□□□□ -1.04
TOP2AP11388 AC010857.1-201ENST00000606398 594 ntBASIC8.57□□□□□ -1.04
TOP2AP11388 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TOP2AP11388 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
TOP2AP11388 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
TOP2AP11388 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
TOP2AP11388 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
TOP2AP11388 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC8.56□□□□□ -1.04
TOP2AP11388 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
TOP2AP11388 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC8.56□□□□□ -1.04
TOP2AP11388 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
TOP2AP11388 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
TOP2AP11388 LINC00993-201ENST00000420453 540 ntBASIC8.56□□□□□ -1.04
TOP2AP11388 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC8.56□□□□□ -1.04
TOP2AP11388 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC8.56□□□□□ -1.04
TOP2AP11388 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
TOP2AP11388 AC134698.5-201ENST00000519444 336 ntBASIC8.56□□□□□ -1.04
TOP2AP11388 IGKV2D-10-201ENST00000520194 281 ntBASIC8.56□□□□□ -1.04
TOP2AP11388 AC069366.1-201ENST00000583159 838 ntBASIC8.56□□□□□ -1.04
TOP2AP11388 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
TOP2AP11388 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC8.56□□□□□ -1.04
TOP2AP11388 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
TOP2AP11388 AC009951.1-201ENST00000623674 2614 ntBASIC8.56□□□□□ -1.04
TOP2AP11388 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
TOP2AP11388 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC8.56□□□□□ -1.04
TOP2AP11388 RBPJP2-201ENST00000618187 1444 ntBASIC8.56□□□□□ -1.04
TOP2AP11388 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
TOP2AP11388 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
TOP2AP11388 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
TOP2AP11388 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
TOP2AP11388 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC8.56□□□□□ -1.04
TOP2AP11388 AC091046.3-201ENST00000631455 1574 ntBASIC8.55□□□□□ -1.04
TOP2AP11388 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms