Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
VPS4BO75351 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS4BO75351 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
VPS4BO75351 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS4BO75351 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
VPS4BO75351 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VPS4BO75351 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS4BO75351 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS4BO75351 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
VPS4BO75351 AL355834.1-201ENST00000556602 3965 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 NEPNP-201ENST00000404786 1371 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS4BO75351 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
VPS4BO75351 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS4BO75351 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
VPS4BO75351 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS4BO75351 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
VPS4BO75351 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
VPS4BO75351 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS4BO75351 WDR95P-201ENST00000425638 1542 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 AC053481.2-202ENST00000582394 1500 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 AC092070.2-203ENST00000598377 3644 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS4BO75351 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS4BO75351 RNA5SP242-201ENST00000364171 118 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS4BO75351 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
VPS4BO75351 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS4BO75351 AL157702.1-201ENST00000398764 426 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 RNA5SP156-201ENST00000410250 110 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS4BO75351 MTCYBP7-201ENST00000419540 1134 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS4BO75351 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS4BO75351 AC069540.1-201ENST00000446320 988 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.81□□□□□ -1.48
VPS4BO75351 AC004022.1-201ENST00000447766 1066 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 RPL5P13-201ENST00000462840 709 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS4BO75351 RPL34P33-201ENST00000486062 334 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 AC083795.1-201ENST00000491760 320 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS4BO75351 MTND4LP2-201ENST00000502312 285 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS4BO75351 RN7SKP238-201ENST00000516483 249 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
VPS4BO75351 IGKV3D-25-201ENST00000519599 235 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS4BO75351 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS4BO75351 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS4BO75351 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS4BO75351 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS4BO75351 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS4BO75351 AP005136.2-201ENST00000583253 1049 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 AC024060.1-201ENST00000607052 494 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 AC022467.1-201ENST00000614738 749 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 AC021755.4-201ENST00000616620 456 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 AC245014.3-201ENST00000618589 347 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 AP002967.1-201ENST00000624203 539 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS4BO75351 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.81□□□□□ -1.48
VPS4BO75351 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS4BO75351 AC079776.5-201ENST00000641920 211 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS4BO75351 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS4BO75351 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
VPS4BO75351 AC007342.7-201ENST00000624610 2337 ntBASIC5.81□□□□□ -1.48
VPS4BO75351 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS4BO75351 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS4BO75351 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS4BO75351 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS4BO75351 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
VPS4BO75351 AC012321.1-201ENST00000561622 1588 ntBASIC5.8□□□□□ -1.48
VPS4BO75351 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
VPS4BO75351 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS4BO75351 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS4BO75351 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS4BO75351 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS4BO75351 AL132640.2-201ENST00000559968 1698 ntBASIC5.8□□□□□ -1.48
VPS4BO75351 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS4BO75351 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
VPS4BO75351 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS4BO75351 OR10R3P-201ENST00000361688 942 ntBASIC5.8□□□□□ -1.48
VPS4BO75351 RNU5B-1-201ENST00000363286 116 ntBASIC5.8□□□□□ -1.48
VPS4BO75351 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS4BO75351 CHMP1B2P-201ENST00000399581 597 ntBASIC5.8□□□□□ -1.48
VPS4BO75351 ATF1P1-201ENST00000406040 927 ntBASIC5.8□□□□□ -1.48
VPS4BO75351 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS4BO75351 RN7SKP108-201ENST00000411367 328 ntBASIC5.8□□□□□ -1.48
VPS4BO75351 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS4BO75351 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS4BO75351 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS4BO75351 DPPA2P2-201ENST00000418220 897 ntBASIC5.8□□□□□ -1.48
VPS4BO75351 RPA2P2-201ENST00000419698 796 ntBASIC5.8□□□□□ -1.48
VPS4BO75351 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS4BO75351 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS4BO75351 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS4BO75351 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms