Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 AC005294.1-201ENST00000355509 281 ntBASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 RN7SKP162-201ENST00000363605 345 ntBASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 RNU1-77P-201ENST00000390868 162 ntBASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 CBX1P3-201ENST00000413296 527 ntBASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 NPM1P4-201ENST00000414095 812 ntBASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 FTLP19-201ENST00000433300 394 ntBASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 OR2AO1P-201ENST00000476497 403 ntBASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 RPEP1-201ENST00000504507 658 ntBASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 ATP5LP3-201ENST00000514223 304 ntBASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 RN7SKP46-201ENST00000515942 234 ntBASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 RNA5SP303-201ENST00000516192 130 ntBASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 AL049779.2-201ENST00000553847 315 ntBASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 RBM22P1-201ENST00000578589 1214 ntBASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 AL162431.4-201ENST00000604674 411 ntBASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 RBPJP2-201ENST00000618187 1444 ntBASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAPPC4Q9Y296 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 AP001273.1-201ENST00000624493 3152 ntBASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 AC093591.2-201ENST00000565254 3843 ntBASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 OR9G4-201ENST00000302957 984 ntBASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 SNORA67-201ENST00000384423 137 ntBASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 RANP7-201ENST00000418085 644 ntBASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 SLC35E1P1-201ENST00000419313 864 ntBASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 RPL7L1P9-201ENST00000431298 745 ntBASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 AL161722.2-201ENST00000434731 981 ntBASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 AC092447.2-201ENST00000435487 669 ntBASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 RPL35AP21-201ENST00000437667 333 ntBASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 RPL7L1P4-201ENST00000513004 707 ntBASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 AC007225.2-201ENST00000562529 256 ntBASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 MIR3176-201ENST00000582210 90 ntBASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 FKBP1AP1-201ENST00000594588 318 ntBASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.77□□□□□ -1.65
TRAPPC4Q9Y296 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms