Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 NANOGP5-201ENST00000424456 877 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 AC093422.3-201ENST00000428506 305 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 AL035458.1-201ENST00000433096 585 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 AL390119.1-201ENST00000440329 312 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 AC015983.1-201ENST00000441577 373 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 CYCSP51-201ENST00000443545 318 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 HMGB1P5-202ENST00000451497 985 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 COPS8P2-201ENST00000473228 627 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 RN7SL799P-201ENST00000475891 298 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 AC005412.2-201ENST00000492004 341 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 AC074255.1-201ENST00000511259 501 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 RN7SKP288-201ENST00000516227 268 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 MIR2117-201ENST00000516780 80 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 MORF4L1P3-201ENST00000525966 950 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
VTA1Q9NP79 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 AC015720.2-201ENST00000567709 334 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 AP001357.1-201ENST00000586304 1053 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 AL160237.3-201ENST00000604114 1013 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 Z82195.1-201ENST00000604558 398 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 GTF2IP4-201ENST00000453092 2054 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
VTA1Q9NP79 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
VTA1Q9NP79 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
VTA1Q9NP79 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
VTA1Q9NP79 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
VTA1Q9NP79 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
VTA1Q9NP79 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.51□□□□□ -1.37
VTA1Q9NP79 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VTA1Q9NP79 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
VTA1Q9NP79 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VTA1Q9NP79 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VTA1Q9NP79 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.51□□□□□ -1.37
VTA1Q9NP79 LINC01963-201ENST00000562038 3148 ntBASIC6.51□□□□□ -1.37
VTA1Q9NP79 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VTA1Q9NP79 AC009779.8-201ENST00000641684 4384 ntBASIC6.51□□□□□ -1.37
VTA1Q9NP79 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
VTA1Q9NP79 ZNF29P-201ENST00000225587 168 ntBASIC6.51□□□□□ -1.37
VTA1Q9NP79 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VTA1Q9NP79 GAPDHP42-201ENST00000406848 981 ntBASIC6.51□□□□□ -1.37
VTA1Q9NP79 RN7SKP59-201ENST00000410520 314 ntBASIC6.51□□□□□ -1.37
VTA1Q9NP79 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.51□□□□□ -1.37
VTA1Q9NP79 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.51□□□□□ -1.37
VTA1Q9NP79 ETF1P3-201ENST00000430422 1160 ntBASIC6.51□□□□□ -1.37
VTA1Q9NP79 CFL1P1-202ENST00000432948 411 ntBASIC6.51□□□□□ -1.37
VTA1Q9NP79 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.51□□□□□ -1.37
VTA1Q9NP79 AL627308.1-201ENST00000435693 821 ntBASIC6.51□□□□□ -1.37
VTA1Q9NP79 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.51□□□□□ -1.37
VTA1Q9NP79 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.51□□□□□ -1.37
VTA1Q9NP79 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.51□□□□□ -1.37
VTA1Q9NP79 CALM1P2-201ENST00000452941 448 ntBASIC6.51□□□□□ -1.37
VTA1Q9NP79 AC011225.1-201ENST00000457751 369 ntBASIC6.51□□□□□ -1.37
VTA1Q9NP79 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.51□□□□□ -1.37
VTA1Q9NP79 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.51□□□□□ -1.37
VTA1Q9NP79 AC139103.1-201ENST00000534696 1030 ntBASIC6.51□□□□□ -1.37
VTA1Q9NP79 LRRC34P1-201ENST00000542742 915 ntBASIC6.51□□□□□ -1.37
VTA1Q9NP79 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC6.51□□□□□ -1.37
VTA1Q9NP79 AC096996.1-201ENST00000563813 325 ntBASIC6.51□□□□□ -1.37
VTA1Q9NP79 RBM22P12-201ENST00000567098 1255 ntBASIC6.51□□□□□ -1.37
VTA1Q9NP79 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.51□□□□□ -1.37
VTA1Q9NP79 AP002906.1-201ENST00000603405 233 ntBASIC6.51□□□□□ -1.37
VTA1Q9NP79 AC097065.2-201ENST00000608159 533 ntBASIC6.51□□□□□ -1.37
VTA1Q9NP79 AL157392.4-201ENST00000609756 345 ntBASIC6.51□□□□□ -1.37
VTA1Q9NP79 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.51□□□□□ -1.37
VTA1Q9NP79 AC024023.1-201ENST00000624530 922 ntBASIC6.51□□□□□ -1.37
VTA1Q9NP79 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.51□□□□□ -1.37
VTA1Q9NP79 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.51□□□□□ -1.37
VTA1Q9NP79 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
VTA1Q9NP79 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
VTA1Q9NP79 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
VTA1Q9NP79 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VTA1Q9NP79 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VTA1Q9NP79 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VTA1Q9NP79 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.51□□□□□ -1.37
VTA1Q9NP79 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VTA1Q9NP79 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms