Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC011453.2-201ENST00000603737 729 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 AL136139.1-201ENST00000605568 222 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 AC006338.1-201ENST00000618453 749 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 IMMTP1-201ENST00000435590 2219 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.59□□□□□ -1.36
SSU72Q9NP77 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSU72Q9NP77 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSU72Q9NP77 SEC63P2-201ENST00000503863 1939 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSU72Q9NP77 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSU72Q9NP77 KYNUP3-201ENST00000574386 1341 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSU72Q9NP77 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSU72Q9NP77 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSU72Q9NP77 RNU6-660P-201ENST00000364566 109 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 RNA5SP474-201ENST00000391234 90 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSU72Q9NP77 LSM5-202ENST00000409292 538 ntTSL 2 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 HMGN1P14-201ENST00000412459 517 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSU72Q9NP77 OR51A5P-201ENST00000415429 942 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 AP003385.1-201ENST00000426387 893 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 AC112492.2-201ENST00000432774 1030 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 PA2G4P6-201ENST00000438325 1197 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 UBE2V1P3-201ENST00000439651 417 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 AC015983.1-201ENST00000441577 373 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 AC112653.1-201ENST00000443851 386 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 AL512593.1-201ENST00000444758 779 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 AC114755.5-201ENST00000447760 831 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 VN1R38P-201ENST00000450265 887 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 FDX1P2-201ENST00000450769 375 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 AC019080.2-201ENST00000453859 394 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 OR5H5P-201ENST00000503164 928 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 SETP21-201ENST00000514799 892 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 IGHV3-32-201ENST00000519182 355 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 AC083923.1-201ENST00000523708 376 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 AP003033.2-201ENST00000528901 805 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 FAM30C-201ENST00000561158 410 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 SNRPCP20-201ENST00000588011 210 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 AP001120.4-201ENST00000590231 108 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 AC024451.4-201ENST00000602578 752 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 AC025449.1-201ENST00000603896 529 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 AC004890.3-201ENST00000605566 1095 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 MIR6834-201ENST00000622807 81 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 AC018692.2-201ENST00000624130 348 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 LINC01739-205ENST00000641890 573 ntBASIC6.58□□□□□ -1.36
SSU72Q9NP77 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSU72Q9NP77 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSU72Q9NP77 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSU72Q9NP77 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSU72Q9NP77 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSU72Q9NP77 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSU72Q9NP77 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSU72Q9NP77 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.58□□□□□ -1.36
SSU72Q9NP77 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSU72Q9NP77 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSU72Q9NP77 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 AL079343.1-201ENST00000572358 1771 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms