Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 RNA5SP382-201ENST00000363355 112 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 RNU1-55P-201ENST00000365510 158 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 TAF9BP1-201ENST00000396646 746 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 GSTA8P-201ENST00000404253 637 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 RN7SKP161-201ENST00000411110 305 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 SETP15-201ENST00000412724 337 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 OR51A3P-201ENST00000413596 924 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 RPLP1P10-201ENST00000413972 339 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 ZNF885P-201ENST00000420174 1098 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AC000089.1-201ENST00000424559 801 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 RPL7P44-201ENST00000424827 742 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AC009784.1-201ENST00000426484 460 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AC018804.1-201ENST00000430381 618 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 MTCO3P21-201ENST00000430791 643 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 THAP5P1-201ENST00000439089 262 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 RPS3AP49-201ENST00000472161 790 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 BZW1P2-201ENST00000473537 826 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 PPP1R2P6-201ENST00000478565 588 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 VPS26AP1-201ENST00000483197 979 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AC015524.1-201ENST00000491585 472 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 XKRY-201ENST00000510392 1100 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 IGKV2D-38-201ENST00000518423 240 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AC073916.1-201ENST00000545095 130 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 NDUFAF4P1-201ENST00000559425 519 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AC090616.2-202ENST00000584248 222 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 MIR212-201ENST00000586026 110 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AC011500.1-201ENST00000601963 469 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AL157899.1-201ENST00000604110 936 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AL359091.2-201ENST00000609303 556 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AC018926.3-201ENST00000618841 406 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AC026124.2-201ENST00000621847 656 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 MIR6503-201ENST00000622884 86 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AC102941.1-201ENST00000567616 1537 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 ELL2P3-201ENST00000457883 1602 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AP000526.1-201ENST00000603308 1388 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
TRIM55Q9BYV6 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
TRIM55Q9BYV6 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 DLEU2L-201ENST00000371086 3555 ntBASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 AC110373.1-201ENST00000505994 3505 ntBASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 OR56B2P-201ENST00000317102 954 ntBASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 RN7SKP130-201ENST00000364924 301 ntBASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 RNU6-619P-201ENST00000365146 108 ntBASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 RN7SKP187-201ENST00000365536 330 ntBASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 OR7E156P-201ENST00000400303 464 ntBASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 HMGA1P8-201ENST00000414130 321 ntBASIC6.52□□□□□ -1.37
TRIM55Q9BYV6 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms