Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC084878.1-201ENST00000480555 648 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC009153.1-201ENST00000485799 496 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 FTH1P23-201ENST00000492727 550 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 CEACAMP10-202ENST00000495431 496 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC025164.1-201ENST00000496249 478 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC108078.3-201ENST00000502633 489 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC008629.3-201ENST00000505786 586 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC107393.1-201ENST00000512403 346 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 RNU4-29P-201ENST00000515943 174 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 RNU7-200P-201ENST00000516105 62 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 RNU6-559P-201ENST00000516151 98 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 snoU109.5-201ENST00000516231 132 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 RN7SKP92-201ENST00000517266 244 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC115837.1-201ENST00000517662 1001 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC107952.1-201ENST00000524200 376 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 BRD9P1-201ENST00000529855 560 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AP004833.3-201ENST00000531893 322 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AL512310.1-201ENST00000548639 172 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC130289.1-201ENST00000577321 73 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 MIR5582-201ENST00000579697 68 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AP001330.4-201ENST00000604350 154 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 MEMO1P5-201ENST00000604810 406 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC113361.1-201ENST00000606683 543 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 RN7SL778P-201ENST00000607160 297 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 RMST_3.1-201ENST00000611651 109 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AL121612.2-201ENST00000612261 482 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 STMN1P1-201ENST00000617809 440 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 RN7SL680P-201ENST00000620379 299 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AP003400.3-201ENST00000624904 346 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AL159972.1-201ENST00000625150 448 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 TEX41-279ENST00000629149 609 ntTSL 5 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 LARS-212ENST00000510191 3737 ntTSL 2 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 WEE2-AS1-206ENST00000478332 2259 ntTSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC004972.1-201ENST00000623934 2209 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 TTF1-201ENST00000334270 3052 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC138207.6-201ENST00000579164 1967 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 SEC63P2-201ENST00000503863 1939 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AL731566.1-201ENST00000620490 1937 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms