Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 USP9YP34-201ENST00000453983 808 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 RNA5SP269-201ENST00000459032 137 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AC023818.1-201ENST00000498379 384 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 MTND5P5-201ENST00000503764 376 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AC135983.3-201ENST00000528049 1226 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AL591767.3-201ENST00000554632 525 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 MIR4732-201ENST00000581873 76 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AC090616.5-202ENST00000582111 297 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AC005730.3-201ENST00000583067 366 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 MIR212-201ENST00000586026 110 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AC091133.5-201ENST00000603088 301 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AL445222.1-201ENST00000607259 628 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AC012360.2-201ENST00000609349 391 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AC104260.1-201ENST00000616660 539 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 PABPC1P8-201ENST00000452851 2086 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AC087392.3-202ENST00000358446 1754 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AL157700.1-201ENST00000561973 1432 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 MTND4P12-201ENST00000498999 1377 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 SNORA70.3-201ENST00000365075 132 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC017035.1-201ENST00000411999 1115 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 TAF13P2-201ENST00000416876 286 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 RPL21P43-201ENST00000425440 472 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 HMGB1P31-201ENST00000437242 427 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 UBBP5-201ENST00000446970 266 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC016687.1-201ENST00000482574 353 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC023424.2-201ENST00000493479 777 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms