Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 7SK.7-201ENST00000603504 247 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AC136443.5-201ENST00000603741 370 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AL158209.2-201ENST00000619266 216 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AL078596.1-201ENST00000624856 447 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AL022578.1-201ENST00000439330 1433 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 ANKRD26P2-201ENST00000445530 1710 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 MRPS17P1-201ENST00000596009 3130 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 AC092111.1-201ENST00000618256 3358 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 AC011379.1-201ENST00000508713 3025 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 OR5P1P-201ENST00000299512 925 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 OR9G4-201ENST00000302957 984 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 RNU1-35P-201ENST00000362782 153 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 RNU6-534P-201ENST00000364877 106 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 TAF9BP2-201ENST00000400856 499 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 IL6-206ENST00000407492 926 ntTSL 3 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 RN7SKP254-201ENST00000410685 310 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 TRGV5P-201ENST00000419915 354 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 ARMC4P1-201ENST00000438905 707 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 GAPDHP37-201ENST00000442317 968 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 OR52A4P-201ENST00000472867 958 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 AC021146.2-201ENST00000504736 556 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 FABP5P6-201ENST00000510588 409 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 SCARNA6-201ENST00000515982 265 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 AC120036.3-201ENST00000517826 292 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 AP000619.3-201ENST00000535634 1127 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 VN1R81P-201ENST00000602085 372 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 AC011891.2-201ENST00000604949 397 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 AL133255.1-201ENST00000606374 441 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 AC015982.1-201ENST00000608113 465 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 AC097641.3-201ENST00000613523 464 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 AC005514.1-201ENST00000623521 208 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 AC124864.2-201ENST00000624736 186 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 CTAGE11P-201ENST00000451540 2353 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 AP000776.1-201ENST00000530032 1663 ntBASIC8.07□□□□□ -1.12
TRIM47Q96LD4 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC8.07□□□□□ -1.12
TRIM47Q96LD4 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
TRIM47Q96LD4 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
TRIM47Q96LD4 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
TRIM47Q96LD4 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRIM47Q96LD4 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRIM47Q96LD4 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
TRIM47Q96LD4 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
TRIM47Q96LD4 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
TRIM47Q96LD4 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC8.06□□□□□ -1.12
TRIM47Q96LD4 RMST-210ENST00000640149 2844 ntTSL 5 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms