Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 MRPL35P2-201ENST00000448009 511 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 VDAC2P4-201ENST00000452925 711 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 RN7SL568P-201ENST00000493069 298 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 LSM3P4-201ENST00000502948 309 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 RNU6-615P-201ENST00000516065 106 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AF186190.1-201ENST00000517470 480 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AC105031.1-201ENST00000518550 476 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AC127381.1-201ENST00000555979 939 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 SULT1C2P2-201ENST00000562517 294 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AC002310.3-201ENST00000569728 723 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AC018695.5-201ENST00000605872 315 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AC005828.7-201ENST00000607331 556 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AC023813.4-201ENST00000607580 580 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AC129778.1-202ENST00000623812 261 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AL591379.1-207ENST00000635982 261 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 NEPNP-201ENST00000404786 1371 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 MRE11P1-201ENST00000464884 2127 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 RN7SKP184-201ENST00000362348 333 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 RNU1-65P-201ENST00000363919 148 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 MIR589-201ENST00000385238 99 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 RPS3AP2-201ENST00000407190 754 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 MIR1203-201ENST00000408812 85 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 NANOGP4-201ENST00000427230 913 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 AC097523.2-201ENST00000435551 652 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 AL645937.3-201ENST00000453647 936 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 AP000547.1-201ENST00000454360 617 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 CEACAMP11-201ENST00000455211 583 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 RN7SL189P-201ENST00000468631 289 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 RN7SL346P-201ENST00000491561 294 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 Y_RNA.667-201ENST00000516212 107 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 RNA5SP438-201ENST00000516561 112 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 CASP1P2-201ENST00000526830 1258 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 MRPS21P7-201ENST00000566937 238 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 RN7SL708P-201ENST00000580952 299 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 RN7SL435P-201ENST00000584418 282 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 AC011500.1-201ENST00000601963 469 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 AC022001.1-201ENST00000605193 268 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 SAMMSON-209ENST00000641222 1100 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 AC073869.10-201ENST00000642016 354 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 CASC19-274ENST00000642018 970 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 AC008691.1-209ENST00000642094 814 ntBASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC71LQ8N9Z2 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 AC006210.2-201ENST00000367074 1545 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms