Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 AL627308.1-201ENST00000435693 821 ntBASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 OR52Y1P-201ENST00000452418 828 ntBASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 EIF3KP3-201ENST00000514461 639 ntBASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 OR8A2P-201ENST00000528631 952 ntBASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 OR10G5P-201ENST00000532733 358 ntBASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 AC010547.7-201ENST00000570323 333 ntBASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 NPM1P45-201ENST00000583151 559 ntBASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 MIR6719-201ENST00000622428 87 ntBASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 AC018445.2-201ENST00000622987 260 ntBASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 GVINP1-202ENST00000531871 7271 ntBASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 AC114947.2-201ENST00000565748 2125 ntBASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 AL929601.4-201ENST00000613011 1341 ntBASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 AC211486.3-201ENST00000412694 621 ntBASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 MTND4LP21-201ENST00000415303 295 ntBASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 GAPDHP58-201ENST00000438477 1006 ntBASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 AC092647.2-201ENST00000452998 253 ntBASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 MTCYBP14-201ENST00000457471 715 ntBASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 RN7SL515P-201ENST00000463999 297 ntBASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 AC097173.1-201ENST00000505862 819 ntBASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 AP002373.2-201ENST00000541631 1060 ntBASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 MTND2P17-201ENST00000550281 688 ntBASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 AC016180.1-201ENST00000567945 403 ntBASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 AC013244.1-201ENST00000604279 193 ntBASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 AL121612.2-201ENST00000612261 482 ntBASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 AC099494.2-201ENST00000623371 978 ntBASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 MAPK10-328ENST00000641553 4009 ntBASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf40Q8IXQ3 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 AC011755.1-201ENST00000623763 2049 ntBASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms